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KRAS,NRASandBRAFmutations in Greek and Romanian patients with colorectal cancer: a cohort study
- Source :
- BMJ Open
- Publication Year :
- 2014
- Publisher :
- BMJ, 2014.
-
Abstract
- Objectives: Treatment decision-making in colorectal cancer is often guided by tumour tissue molecular analysis. The aim of this study was the development and validation of a high-resolution melting (HRM) method for the detection of KRAS, NRAS and BRAF mutations in Greek and Romanian patients with colorectal cancer and determination of the frequency of these mutations in the respective populations. Setting: Diagnostic molecular laboratory located in Athens, Greece. Participants: 2425 patients with colorectal cancer participated in the study. Primary and secondary outcome measures: 2071 patients with colorectal cancer (1699 of Greek and 372 of Romanian origin) were analysed for KRAS exon 2 mutations. In addition, 354 tumours from consecutive patients (196 Greek and 161 Romanian) were subjected to full KRAS (exons 2, 3 and 4), NRAS (exons 2, 3 and 4) and BRAF (exon 15) analysis. KRAS, NRAS and BRAF mutation detection was performed by a newly designed HRM analysis protocol, followed by Sanger sequencing. Results: KRAS exon 2 mutations (codons 12/13) were detected in 702 of the 1699 Greek patients with colorectal carcinoma analysed (41.3%) and in 39.2% (146/372) of the Romanian patients. Among the 354 patients who were subjected to full KRAS, NRAS and BRAF analysis, 40.96% had KRAS exon 2 mutations (codons 12/13). Among the KRAS exon 2 wild-type patients 15.31% harboured additional RAS mutations and 12.44% BRAF mutations. The newly designed HRM method used showed a higher sensitivity compared with the sequencing method. Conclusions: The HRM method developed was shown to be a reliable method for KRAS, NRAS and BRAF mutation detection. Furthermore, no difference in the mutation frequency of KRAS, NRAS and BRAF was observed between Greek and Romanian patients with colorectal cancer. 4 5
- Subjects :
- Neuroblastoma RAS viral oncogene homolog
Oncology
endocrine system diseases
Colorectal cancer
Braf protein
Procedures
Nucleic Acid Denaturation
Bioinformatics
medicine.disease_cause
GTP Phosphohydrolases
Cohort Studies
Tumour tissue
Membrane proteins
Guanosine triphosphatase
Allele
Greece
Validation study
General Medicine
Polymerase chain reaction
Molecular analysis
Colorectal carcinoma
Piacenzian
Molecular Diagnostic Techniques
Cohort studies
Molecular diagnosis
KRAS
Cohort analysis
Restriction fragment length polymorphism
Colorectal Neoplasms
Ras protein
Protein p21
Human
Cohort study
Proto-Oncogene Proteins B-raf
medicine.medical_specialty
High resolution melting analysis
Exon
Wild type
Major clinical study
Article
Colorectal neoplasms
Gtp phosphohydrolases
Proto-Oncogene Proteins p21(ras)
Proto-oncogene proteins b-raf
Nras protein
Internal medicine
Genetics
medicine
Humans
Gene mutation
Colorectal tumor
B raf kinase
Codon
neoplasms
Molecular Biology
Kras protein
Romania
business.industry
Research
Membrane Proteins
medicine.disease
Gene frequency
digestive system diseases
Proto-oncogene proteins p21(ras)
K ras protein
Dna denaturation
Membrane protein
Mutation
Cancer patient
Nucleic acid denaturation
business
Nucleotide sequence
Molecular diagnostic techniques
Subjects
Details
- ISSN :
- 20446055
- Volume :
- 4
- Database :
- OpenAIRE
- Journal :
- BMJ Open
- Accession number :
- edsair.doi.dedup.....532384c0ee7a2917cd52082bdca1849d
- Full Text :
- https://doi.org/10.1136/bmjopen-2013-004652