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The Gene Ontology: enhancements for 2011

Authors :
P D'Eustachio
Benjamin C. Hitz
Julie Park
Paul Browne
Douglas G. Howe
Cynthia J. Krieger
Kalpana Karra
Stan Laulederkind
Karen R. Christie
Susan Tweedie
Eurie L. Hong
Lydie Bougueleret
Michele Magrane
Cathy R. Gresham
Rolf Apweiler
Lisa Matthews
Dong Li
Philippa J. Talmud
Ioannis Xenarios
J. M. Cherry
Tanya Z. Berardini
Deborah A. Siegele
Rama Balakrishnan
D. Sitnikov
A. Auchinchloss
Selina S. Dwight
Tony Sawford
Paul J. Kersey
Ruth C. Lovering
Ruth Y. Eberhardt
Ursula Hinz
Lakshmi Pillai
Sylvain Poux
Edith D. Wong
Klemens Pichler
Kati Laiho
Malcolm J. Gardner
Stephen G. Oliver
Lionel Breuza
Kara Dolinski
P Lemercier
Kristian B. Axelsen
Midori A. Harris
Adrienne E. Zweifel
H. Drabkin
Guillaume Keller
Marek S. Skrzypek
Daniel M. Staines
Fiona M. McCarthy
Nicholas H. Brown
Mark D. McDowall
Antonia Lock
Mary Shimoyama
Maria C. Costanzo
Teresia Buza
S. Jimenez
Rex L. Chisholm
Paul W. Sternberg
Hui Wang
Nadine Gruaz-Gumowski
Chantal Hulo
Rebecca E. Foulger
Melinda R. Dwinell
Judith A. Blake
Marcus C. Chibucos
B. K. McIntosh
C. D. Amundsen
Jane Lomax
L Famiglietti
Tom Hayman
Michael Tognolli
Eva Huala
James C. Hu
Patrick Masson
Maria Jesus Martin
Benoit Bely
Shuai Weng
Heather C. Wick
E. Dimmer
L. Ni
Catherine Rivoire
Christopher J. Mungall
H. Sehra
P. Duek-Roggli
Maria Victoria Schneider
Dianna G. Fisk
Michael S. Livstone
Ivo Pedruzzi
Shyamala Sundaram
Donna K. Slonim
Isabelle Cusin
Stuart R. Miyasato
Timothy F. Lowry
Varsha K. Khodiyar
Seth Carbon
Elisabeth Coudert
Jürg Bähler
Juancarlos Chan
Evelyn Camon
Daniel P. Renfro
Anne Estreicher
M. C. Blatter
Robert S. Nash
P Gaudet
Sven Heinicke
K. Van Auken
Stacia R. Engel
Alan Bridge
Ralf Stephan
Mary E. Dolan
Shane C. Burgess
Petra Fey
Shur-Jen Wang
Damien Lieberherr
Duncan Legge
P. Porras Millán
Andre Stutz
Yasmin Alam-Faruque
Gail Binkley
Bernd Roechert
S. Branconi-Quintaje
Ghislaine Argoud-Puy
S. Basu
Kim Rutherford
M. Moinat
Monte Westerfield
Arnaud Gos
Eleanor J Stanley
Valerie Wood
Ranjana Kishore
Diego Poggioli
S. Ferro-Rojas
Victoria Petri
Florence Jungo
Suzanna E. Lewis
Emmanuel Boutet
Warren A. Kibbe
M Feuermann
Claire O'Donovan
W. M. Chan
J. James
David P. Hill
Rachael P. Huntley
M. Gwinn Giglio
Paul Thomas
Jodi E. Hirschman
Paola Roncaglia
Gene Ontology Consortium
Blake, JA.
Dolan, M.
Drabkin, H.
Hill, DP.
Ni, L.
Sitnikov, D.
Burgess, S.
Buza, T.
Gresham, C.
McCarthy, F.
Pillai, L.
Wang, H.
Carbon, S.
Lewis, SE.
Mungall, CJ.
Gaudet, P.
Chisholm, RL.
Fey, P.
Kibbe, WA.
Basu, S.
Siegele, DA.
McIntosh, BK.
Renfro, DP.
Zweifel, AE.
Hu, JC.
Brown, NH.
Tweedie, S.
Alam-Faruque, Y.
Apweiler, R.
Auchinchloss, A.
Axelsen, K.
Argoud-Puy, G.
Bely, B.
Blatter, M-.
Bougueleret, L.
Boutet, E.
Branconi, S.
Breuza, L.
Bridge, A.
Browne, P.
Chan, WM.
Coudert, E.
Cusin, I.
Dimmer, E.
Duek-Roggli, P.
Eberhardt, R.
Estreicher, A.
Famiglietti, L.
Ferro-Rojas, S.
Feuermann, M.
Gardner, M.
Gos, A.
Gruaz-Gumowski, N.
Hinz, U.
Hulo, C.
Huntley, R.
James, J.
Jimenez, S.
Jungo, F.
Keller, G.
Laiho, K.
Legge, D.
Lemercier, P.
Lieberherr, D.
Magrane, M.
Martin, MJ.
Masson, P.
Moinat, M.
O'Donovan, C.
Pedruzzi, I.
Pichler, K.
Poggioli, D.
Porras Millán, P.
Poux, S.
Rivoire, C.
Roechert, B.
Sawford, T.
Schneider, M.
Sehra, H.
Stanley, E.
Stutz, A.
Sundaram, S.
Tognolli, M.
Xenarios, I.
Foulger, R.
Lomax, J.
Roncaglia, P.
Camon, E.
Khodiyar, VK.
Lovering, RC.
Talmud, PJ.
Chibucos, M.
Gwinn Giglio, M.
Dolinski, K.
Heinicke, S.
Livstone, MS.
Stephan, R.
Harris, MA.
Oliver, SG.
Rutherford, K.
Wood, V.
Bahler, J.
Lock, A.
Kersey, PJ.
McDowall, MD.
Staines, DM.
Dwinell, M.
Shimoyama, M.
Laulederkind, S.
Hayman, T.
Wang, S-.
Petri, V.
Lowry, T.
D'Eustachio, P.
Matthews, L.
Amundsen, CD.
Balakrishnan, R.
Binkley, G.
Cherry, JM.
Christie, KR.
Costanzo, MC.
Dwight, SS.
Engel, SR.
Fisk, DG.
Hirschman, JE.
Hitz, BC.
Hong, EL.
Karra, K.
Krieger, CJ.
Miyasato, SR.
Nash, RS.
Park, J.
Skrzypek, MS.
Weng, S.
Wong, ED.
Berardini, TZ.
Li, D.
Huala, E.
Slonim, D.
Wick, H.
Thomas, P.
Chan, J.
Kishore, R.
Sternberg, P.
Van Auken, K.
Howe, D.
Westerfield, M.
Source :
Nucleic Acids Research, Nucleic Acids Research, vol. 40, no. Database issue, pp. D559-D564
Publication Year :
2011
Publisher :
Oxford University Press (OUP), 2011.

Abstract

The Gene Ontology (GO) (http://www.geneontology.org) is a community bioinformatics resource that represents gene product function through the use of structured, controlled vocabularies. The number of GO annotations of gene products has increased due to curation efforts among GO Consortium (GOC) groups, including focused literature-based annotation and ortholog-based functional inference. The GO ontologies continue to expand and improve as a result of targeted ontology development, including the introduction of computable logical definitions and development of new tools for the streamlined addition of terms to the ontology. The GOC continues to support its user community through the use of e-mail lists, social media and web-based resources.

Details

ISSN :
13624962 and 03051048
Volume :
40
Database :
OpenAIRE
Journal :
Nucleic Acids Research
Accession number :
edsair.doi.dedup.....5585f546fdf0ce700258904074512169