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Genome-Wide Identification and Characterization of the Brassinazole-resistant (BZR) Gene Family and Its Expression in the Various Developmental Stage and Stress Conditions in Wheat (Triticum aestivum L.)

Authors :
Manu Kumar
Bhagwat Singh Kherawat
Mandakini Kabi
Ansuman Khandual
Debanjana Saha
Mahipal Singh Kesawat
Asjad Ali
Sandeep Rout
Anupama Singh
Ramasubba Reddy Palem
Prajjal Dey
Sang-Min Chung
Manorama
Avinash A. Kadam
Ravi Gupta
Hyun Uk Kim
Debanjana Debnath
Source :
International Journal of Molecular Sciences, Vol 22, Iss 8743, p 8743 (2021), International Journal of Molecular Sciences, Volume 22, Issue 16
Publication Year :
2021
Publisher :
MDPI AG, 2021.

Abstract

Brassinosteroids (BRs) play crucial roles in various biological processes, including plant developmental processes and response to diverse biotic and abiotic stresses. However, no information is currently available about this gene family in wheat (Triticum aestivum L.). In the present investigation, we identified the BZR gene family in wheat to understand the evolution and their role in diverse developmental processes and under different stress conditions. In this study, we performed the genome-wide analysis of the BZR gene family in the bread wheat and identified 20 TaBZR genes through a homology search and further characterized them to understand their structure, function, and distribution across various tissues. Phylogenetic analyses lead to the classification of TaBZR genes into five different groups or subfamilies, providing evidence of evolutionary relationship with Arabidopsis thaliana, Zea mays, Glycine max, and Oryza sativa. A gene exon/intron structure analysis showed a distinct evolutionary path and predicted the possible gene duplication events. Further, the physical and biochemical properties, conserved motifs, chromosomal, subcellular localization, and cis-acting regulatory elements were also examined using various computational approaches. In addition, an analysis of public RNA-seq data also shows that TaBZR genes may be involved in diverse developmental processes and stress tolerance mechanisms. Moreover, qRT-PCR results also showed similar expression with slight variation. Collectively, these results suggest that TaBZR genes might play an important role in plant developmental processes and various stress conditions. Therefore, this work provides valuable information for further elucidate the precise role of BZR family members in wheat.

Details

ISSN :
14220067
Volume :
22
Database :
OpenAIRE
Journal :
International Journal of Molecular Sciences
Accession number :
edsair.doi.dedup.....58b2d99e9887cb2521f671334f0ddda7
Full Text :
https://doi.org/10.3390/ijms22168743