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Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DLT)
- Source :
- Standards in Genomic Sciences 7 (2012), Standards in Genomic Sciences, 7, 304-319, Standards in Genomic Sciences
- Publication Year :
- 2012
-
Abstract
- Strain DLT (= DSM 2154 = ATCC 23193 = NCIMB 8452) is the type strain of the species Desulfotomaculum ruminis [1], one out of current-ly 30 species with validly published names in the paraphyletic genus Desulfotomaculum [2,3]. Strain DLT was initially isolated by G. S. Coleman in the 1950s from the rumen of hay-fed sheep [4]. Dissimilatory reduction of sulfate to sulfide in the rumen was first demonstrated by Lewis [5], who dosed fistulated sheep with sulfate and deter-mined the amount of sulfide produced. As high amounts of sulfide may be toxic to animals, bacte-rial sulfate-reduction in ruminants was a concern due to the presence of sulfate in grass and hay. D. ruminis represented the first pure culture of a sul-fate-reducing bacterium isolated from the rumen. The genus name was derived from the Latin words 'de', from, ‘sulfur’, sulfur, and 'tomaculum', a kind of sausage, meaning 'a sausage-shaped sul-fate reducer' [2,6]. The species epithet is derived from the Latin word 'rumen', throat, first stomach (rumen) of a ruminant, meaning of a rumen [1,2]. Here, we present a summary classification and a set of features for D. ruminis strain DLT, together with the description of the complete genomic se-quencing and annotation. The complete genome sequence of strain DLT will provide valuable in-formation for defining a more adequate descrip-tion of the currently paraphyletic genus Desulfotomaculum
- Subjects :
- sulfate-reducer
archaea
hydrogen sulfide
system
Genome
Microbiology
hydrogenases
03 medical and health sciences
Microbiologie
Genetics
site
Systems and Synthetic Biology
Gene
Peptococcaceae
database
030304 developmental biology
VLAG
Whole genome sequencing
Clostridiales
0303 health sciences
Systeem en Synthetische Biologie
WIMEK
biology
030306 microbiology
Chromosome
tool
biology.organism_classification
Short Genome Reports
motile
incomplete oxidizer
CSP 2009
classification
anaerobic
mesophilic
sporulating
bacterial names
Bacteria
mixotrophic
Archaea
Subjects
Details
- Language :
- English
- ISSN :
- 19443277
- Database :
- OpenAIRE
- Journal :
- Standards in Genomic Sciences 7 (2012), Standards in Genomic Sciences, 7, 304-319, Standards in Genomic Sciences
- Accession number :
- edsair.doi.dedup.....5e84dea648dd89e4a60eb8dff7cfb74b