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Genotype–Phenotype Correlations of Dystrophic Epidermolysis Bullosa in India: Experience from a Tertiary Care Centre
- Source :
- Acta Dermato-Venereologica, Vol 98, Iss 9, Pp 873-879 (2018)
- Publication Year :
- 2018
- Publisher :
- Society for Publication of Acta Dermato-Venereologica, 2018.
-
Abstract
- Recent advances in the field of genomics have seen the successful implementation of whole exome sequencing as a rapid and efficient diagnostic strategy in several genodermatoses. The aim of this study was to explore the potential of molecular studies in dystrophic epidermolysis bullosa (DEB) in India. Whole exome sequencing was performed using genomic DNA from each case of epidermolysis bullosa, followed by massively parallel sequencing. Resulting reads were mapped to the human reference genome hg19. Sanger sequencing subsequently confirmed the potentially pathogenic mutations. Whole exome sequencing of 18 patients with DEB from 17 unrelated Indian families revealed 20 distinct sequence variants in the COL7A1 gene including 2 widely prevalent mutations. Dominant inheritance was seen in 7 patients, while 11 patients showed a highly variable recessive DEB. This preliminary study using exome sequencing is clearly encouraging and will serve as the basis for future large-scale molecular studies to actively identify and understand DEB in the Indian population.
- Subjects :
- Male
0301 basic medicine
Collagen Type VII
Heredity
Adolescent
India
wholeexomesequencing
Genomics
Dermatology
030105 genetics & heredity
Tertiary Care Centers
Young Adult
03 medical and health sciences
symbols.namesake
Mutation Rate
Risk Factors
Exome Sequencing
medicine
lcsh:Dermatology
Humans
Genetic Predisposition to Disease
dystrophicEB
Child
Exome sequencing
Genetics
Sanger sequencing
Massive parallel sequencing
business.industry
High-Throughput Nucleotide Sequencing
General Medicine
lcsh:RL1-803
medicine.disease
collagenVII
Epidermolysis Bullosa Dystrophica
Pedigree
genomic DNA
Dystrophic epidermolysis bullosa
Phenotype
Child, Preschool
Mutation
symbols
Female
Epidermolysis bullosa
business
Preliminary Data
Reference genome
Subjects
Details
- Language :
- English
- ISSN :
- 16512057 and 00015555
- Volume :
- 98
- Issue :
- 9
- Database :
- OpenAIRE
- Journal :
- Acta Dermato-Venereologica
- Accession number :
- edsair.doi.dedup.....63dbdc263ef93b8b6c3930a32fe4b108