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Circular RNA Expression Profiles and the Pro-tumorigenic Function of CircRNA_10156 in Hepatitis B Virus-Related Liver Cancer
- Source :
- International Journal of Medical Sciences
- Publication Year :
- 2020
- Publisher :
- Ivyspring International Publisher, 2020.
-
Abstract
- Liver cancer is one of the most common malignant tumors in the world. Circular RNAs (circRNAs) perform important functions in cancer progression and are regarded as prospective biomarkers for cancer diagnosis and therapy. Here, we used the high-throughput RNA sequencing technology in conjunction with bioinformatics tools to profile circRNA expression in patients with HBV-related liver cancer. A total of 13,124 circRNAs were identified in HBV-related liver cancer, approximately 86.25% of which were sense-overlapping circRNAs. Moreover, 2,996 circRNAs exhibited different expression patterns between liver cancer tissues and matched pericancerous tissues. Function annotation indicated that these aberrantly expressed circRNAs were primarily engaged in cellular processes and cancer-associated pathways. Notably, the circRNA-miRNA interaction networks showed that 6,020 circRNAs were predicted to target 1,654 miRNAs. Quantitative RT-PCR (qRT-PCR) assay indicated that ten randomly selected circRNAs displayed consistent expression patterns with the sequencing results. We further predicted that circRNA_10156 might work as a molecular sponge of miR-149-3p, which served an important function in tumor development. Consequently, our results demonstrated that depletion of circRNA_10156 upregulated miR-149-3p, reduced Akt1 expression, and suppressed liver cancer cell proliferation. The present study will facilitate the elucidation of biological functions of circRNAs in the progression of HBV-related liver cancer providing prospective biomarkers and therapeutic targets for this disease. Our findings also reveal that circRNA_10156 might represent a promising therapeutic target for liver cancer management.
- Subjects :
- Male
Hepatitis B virus
Therapeutic target
AKT1
Biology
Real-Time Polymerase Chain Reaction
03 medical and health sciences
0302 clinical medicine
Downregulation and upregulation
Circular RNA
Cell Line, Tumor
microRNA
medicine
Humans
Cell Proliferation
High-throughput sequencing
Cancer biomarker
Liver Neoplasms
Computational Biology
RNA
Cancer
Hep G2 Cells
RNA, Circular
General Medicine
Middle Aged
medicine.disease
Cancer research
Female
030211 gastroenterology & hepatology
Liver cancer
Software
Function (biology)
Research Paper
Subjects
Details
- ISSN :
- 14491907
- Volume :
- 17
- Database :
- OpenAIRE
- Journal :
- International Journal of Medical Sciences
- Accession number :
- edsair.doi.dedup.....653f31b74bf86a7936c49c3de3f7bca9
- Full Text :
- https://doi.org/10.7150/ijms.45637