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Frequency of three polymorphisms of the CCL5 gene (rs2107538, rs2280788 and rs2280789) and their implications for the phenotypic expression of sickle cell anemia in Tunisia
- Source :
- Polish journal of pathology : official journal of the Polish Society of Pathologists, Polish journal of pathology : official journal of the Polish Society of Pathologists, 2013, 64 (2), pp.84-9. ⟨10.5114/PJP.2013.36012⟩
- Publication Year :
- 2013
- Publisher :
- Termedia Sp. z.o.o., 2013.
-
Abstract
- International audience; The pro-inflammatory context of sickle cell disease promotes the liberation of cytokines such as CCL5, encoded by a gene located on chromosome 17. Herein, the occurrence of three variations of CCL5 in sickle cell anemia (SCA) and their relations to two major complications - painful crisis and presence of infections - were investigated. 100 SCA Tunisian patients and 100 healthy subjects were included in the case control study. Then the sample of patients was divided into two groups according to the presence or absence of each complication. The polymorphisms, namely g.-403G>A, g.-28C>G and g.In1.+1T>C, were analyzed by PCR/sequencing. Our findings show the presence of eight genotypes, namely GG, GA and AA of g.-403G>A, CC, CG and GG of g.-28C>G, and TT and TC of g.In1.+1T>C. The frequencies of studied single nucleotide polymorphisms (SNPs) and haplotypes in SCA patients do not differ significantly from healthy control group results. There is also no significant association between the analyzed polymorphisms and complications as for painful crisis and presence of infections (p > 0.05). Altogether, our data support the conclusion that the three polymorphisms of CCL5, namely g.-403G>A, g.-28C>G and g.In1.+1T>C, do not seem to be involved in the clinical variability of SCA in Tunisia.
- Subjects :
- Adult
Male
Tunisia
[SDV]Life Sciences [q-bio]
Single-nucleotide polymorphism
Context (language use)
Anemia, Sickle Cell
Polymorphism, Single Nucleotide
CCL5
Pathology and Forensic Medicine
RANTES
03 medical and health sciences
0302 clinical medicine
sickle cell anemia
Genotype
medicine
Humans
infections
Chemokine CCL5
030304 developmental biology
0303 health sciences
Reverse Transcriptase Polymerase Chain Reaction
business.industry
Haplotype
Case-control study
General Medicine
medicine.disease
Sickle cell anemia
3. Good health
Chromosome 17 (human)
Phenotype
Case-Control Studies
Immunology
Female
polymorphisms
painful crisis
business
030215 immunology
Subjects
Details
- ISSN :
- 12339687
- Volume :
- 2
- Database :
- OpenAIRE
- Journal :
- Polish Journal of Pathology
- Accession number :
- edsair.doi.dedup.....6a062f728d5f5ce11e607e19dcedaed7
- Full Text :
- https://doi.org/10.5114/pjp.2013.36012