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Acinetobacter sp. strain Ths, a novel psychrotolerant and alkalitolerant bacterium that utilizes hydrocarbon
- Source :
- Extremophiles. 12:729-734
- Publication Year :
- 2008
- Publisher :
- Springer Science and Business Media LLC, 2008.
-
Abstract
- A novel psychrotolerant, alkalitolerant bacterium, strain Ths, was isolated from a soil sample immersed in hot spring water containing hydrocarbons and grown on a chemically defined medium containing n-tetradecane as the sole carbon source. The isolate grew at 0 degrees C but not at temperatures higher than 45 degrees C; its optimum growth temperature was 27 degrees C. It grew in the pH range of 7-9. The strain utilized C(13)-C(30) n-alkane and fluorene at pH 9 and 4 degrees C. To our knowledge, this is the first report on the bacterium that utilizes a wide range of hydrocarbons at a high pH and a low temperature. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain Ths is closely related to genomic species 6 ATCC 17979 (99.1% similarity), genomic species BJ13/TU14 ATCC 17905 (97.8% similarity), genomic species 9 ATCC 9957 (97.6% similarity) belonging to the genus Acinetobacter and to Acinetobacter calcoaceticus JCM 6842(T) (97.5% similarity). DNA-DNA hybridization revealed that the isolate has 62, 25, 18 and 19% relatedness, respectively, to genomic species 6 ATCC 17979, genomic species BJ13/TU14 ATCC 17905, genomic species 9 ATCC 9957 and A. calcoaceticus, respectively.
- Subjects :
- DNA, Bacterial
Biology
Polymerase Chain Reaction
Microbiology
Substrate Specificity
RNA, Ribosomal, 16S
Extreme environment
Phylogeny
Soil Microbiology
DNA Primers
Acinetobacter
Phylogenetic tree
Strain (chemistry)
Nucleic Acid Hybridization
General Medicine
16S ribosomal RNA
biology.organism_classification
Hydrocarbons
Kinetics
RNA, Bacterial
Molecular Medicine
Acinetobacter calcoaceticus
Soil microbiology
Bacteria
Subjects
Details
- ISSN :
- 14334909 and 14310651
- Volume :
- 12
- Database :
- OpenAIRE
- Journal :
- Extremophiles
- Accession number :
- edsair.doi.dedup.....6aeaf9bb5f8533793c1990bc636665ce
- Full Text :
- https://doi.org/10.1007/s00792-008-0180-8