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NADP+ binding effects tryptophan accessibility, folding and stability of recombinant B. malayi G6PD
- Source :
- International Journal of Biological Macromolecules. 85:645-654
- Publication Year :
- 2016
- Publisher :
- Elsevier BV, 2016.
-
Abstract
- Brugia malayi Glucose 6-phosphate dehydrogenase apoenzyme (BmG6PD) was expressed and purified by affinity chromatography to study the differences in kinetic properties of enzyme and the effect of the cofactor NADP(+) binding on enzyme stability. The presence of cofactor NADP(+) influenced the tertiary structure of enzyme due to significant differences in the tryptophan microenvironment. However, NADP(+) binding have no effect on secondary structure of the enzyme. Quenching with acrylamide indicated that two or more tryptophan residues became accessible upon cofactor binding. Unfolding and cross linking study of BmG6PD showed that NADP(+) stabilized the protein in presence of high concentration of urea/GdmCl. A homology model of BmG6PD constructed using human G6PD (PDB id: 2BH9) as a template indicated 34% α-helix, 19% β-sheet and 47% random coil conformations in the predicted model of the enzyme. In the predicted model binding of NADP(+) to BmG6PD was less tight with the structural sites (-10.96 kJ/mol binding score) as compared with the coenzyme site (-15.47 kJ/mol binding score).
- Subjects :
- Models, Molecular
0301 basic medicine
Protein Folding
Molecular Conformation
Dehydrogenase
Glucosephosphate Dehydrogenase
Molecular Dynamics Simulation
Biology
Biochemistry
Cofactor
03 medical and health sciences
Affinity chromatography
Structural Biology
Animals
Molecular Biology
Brugia malayi
Protein Unfolding
chemistry.chemical_classification
Cofactor binding
030102 biochemistry & molecular biology
Protein Stability
Spectrum Analysis
Tryptophan
General Medicine
Recombinant Proteins
Protein tertiary structure
Molecular Docking Simulation
030104 developmental biology
Enzyme
chemistry
biology.protein
NADP binding
NADP
Protein Binding
Subjects
Details
- ISSN :
- 01418130
- Volume :
- 85
- Database :
- OpenAIRE
- Journal :
- International Journal of Biological Macromolecules
- Accession number :
- edsair.doi.dedup.....6b3eb8bd0481df1e6fc86a8f6e65e38e