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Bacterial taxa-area and distance-decay relationships in marine environments

Authors :
Lucie Zinger
Alban Ramette
Antje Boetius
Source :
Molecular Ecology, Zinger, L.; Boetius, A.; Ramette, Alban Nicolas (2014). Bacterial taxa-area and distance-decay relationships in marine environments. Molecular Ecology, 23(4), pp. 954-964. Wiley-Blackwell 10.1111/mec.12640
Publication Year :
2013
Publisher :
Zenodo, 2013.

Abstract

The taxa-area relationship (TAR) and the distance-decay relationship (DDR) both describe spatial turnover of taxa, and are central patterns of biodiversity. Here, we compared TAR and DDR of bacterial communities across different marine realms and ecosystems at the global scale. To obtain reliable global estimates for both relationships, we quantified the poorly assessed effects of sequencing depth, rare taxa removal, and number of sampling sites. Slope coefficients of bacterial TARs were within the range of those of plants and animals, whereas slope coefficients of bacterial DDR were much lower. Slope coefficients were mostly affected by removing rare taxa and by the number of sampling sites considered in the calculations. TAR and DDR slope coefficients were overestimated at sequencing depth < 4,000 sequences per sample. Noticeably bacterial TAR and DDR patterns did not correlate with each other both within and across ecosystem types, suggesting that (i) TAR cannot be directly derived from DDR and (ii) TAR and DDR may be influenced by different ecological factors. Nevertheless, we found marine bacterial TAR and DDR to be steeper in ecosystems associated with high environmental heterogeneity or spatial isolation, namely marine sediments and coastal environments compared to pelagic ecosystems. Hence, our study provides information on macroecological patterns of marine bacteria, as well as methodological and conceptual insights to ecologists at a time when biodiversity surveys increasingly make use of high-throughput sequencing technologies.

Details

Database :
OpenAIRE
Journal :
Molecular Ecology, Zinger, L.; Boetius, A.; Ramette, Alban Nicolas (2014). Bacterial taxa-area and distance-decay relationships in marine environments. Molecular Ecology, 23(4), pp. 954-964. Wiley-Blackwell 10.1111/mec.12640 <http://dx.doi.org/10.1111/mec.12640>
Accession number :
edsair.doi.dedup.....6cebc12addbfcffc33852d8a050945e3
Full Text :
https://doi.org/10.1111/mec.12640