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CATMoS: Collaborative Acute Toxicity Modeling Suite

Authors :
Tyler Peryea
Ahsan Habib Polash
Alessandra Roncaglioni
Daniel M. Wilson
Warren Casey
Patricia Ruiz
Nathalie Alépée
Sherif Farag
Giovanna J. Lavado
Kimberley M. Zorn
Alexey V. Zakharov
Davide Ballabio
Katrina M. Waters
Risa Sayre
Giuseppe Felice Mangiatordi
Orazio Nicolotti
Nicole Kleinstreuer
Pankaj R. Daga
Sean Ekins
Kamel Mansouri
Liguo Wang
Judy Strickland
Matthew J. Hirn
Sudin Bhattacharya
Dac-Trung Nguyen
Emilio Benfenati
Ignacio J. Tripodi
Amanda K. Parks
Garett Goh
Dennis G. Thomas
Glenn J. Myatt
Prachi Pradeep
Gergely Zahoranszky-Kohalmi
Anton Simeonov
Arthur C. Silva
Grace Patlewicz
Timothy Sheils
Stephen Boyd
Agnes L. Karmaus
Ahmed Sayed
Alex M. Clark
Todd M. Martin
Pavel Karpov
Jeffery M. Gearhart
Robert Rallo
D Allen
Charles Siegel
Zhen Zhang
Zijun Xiao
Alexander Tropsha
Stephen J. Capuzzi
Alexandru Korotcov
Carolina Horta Andrade
Noel Southall
Viviana Consonni
Igor V. Tetko
Jeremy M. Fitzpatrick
Andrew J. Wedlake
Denis Fourches
Zhongyu Wang
Vinicius M. Alves
Eugene N. Muratov
Timothy E. H. Allen
Andrea Mauri
James B. Brown
Alexandre Varnek
Yun Tang
Sanjeeva J. Wijeyesakere
Daniel P. Russo
Cosimo Toma
Christopher M. Grulke
Michael S. Lawless
Domenico Gadaleta
Paritosh Pande
Thomas Hartung
Jonathan M. Goodman
Kristijan Vukovic
Joyce V. Bastos
Daniela Trisciuzzi
Fagen F. Zhang
Domenico Alberga
Thomas Luechtefeld
Dan Marsh
Tyler R. Auernhammer
Shannon M. Bell
Xinhao Li
Brian J. Teppen
F. Lunghini
Sergey Sosnin
Hao Zhu
Feng Gao
Craig Rowlands
Tongan Zhao
R Todeschini
Valery Tkachenko
Francesca Grisoni
Hongbin Yang
Yaroslav Chushak
Maxim V. Fedorov
Heather L. Ciallella
Gilles Marcou
Goodman, Jonathan [0000-0002-8693-9136]
Yang, Hongbin [0000-0001-6740-1632]
Apollo - University of Cambridge Repository
Mansouri, K
Karmaus, A
Fitzpatrick, J
Patlewicz, G
Pradeep, P
Alberga, D
Alepee, N
Allen, T
Allen, D
Alves, V
Andrade, C
Auernhammer, T
Ballabio, D
Bell, S
Benfenati, E
Bhattacharya, S
Bastos, J
Boyd, S
Brown, J
Capuzzi, S
Chushak, Y
Ciallella, H
Clark, A
Consonni, V
Daga, P
Ekins, S
Farag, S
Fedorov, M
Fourches, D
Gadaleta, D
Gao, F
Gearhart, J
Goh, G
Goodman, J
Grisoni, F
Grulke, C
Hartung, T
Hirn, M
Karpov, P
Korotcov, A
Lavado, G
Lawless, M
Li, X
Luechtefeld, T
Lunghini, F
Mangiatordi, G
Marcou, G
Marsh, D
Martin, T
Mauri, A
Muratov, E
Myatt, G
Nguyen, D
Nicolotti, O
Note, R
Pande, P
Parks, A
Peryea, T
Polash, A
Rallo, R
Roncaglioni, A
Rowlands, C
Ruiz, P
Russo, D
Sayed, A
Sayre, R
Sheils, T
Siegel, C
Silva, A
Simeonov, A
Sosnin, S
Southall, N
Strickland, J
Tang, Y
Teppen, B
Tetko, I
Thomas, D
Tkachenko, V
Todeschini, R
Toma, C
Tripodi, I
Trisciuzzi, D
Tropsha, A
Varnek, A
Vukovic, K
Wang, Z
Wang, L
Waters, K
Wedlake, A
Wijeyesakere, S
Wilson, D
Xiao, Z
Yang, H
Zahoranszky-Kohalmi, G
Zakharov, A
Zhang, F
Zhang, Z
Zhao, T
Zhu, H
Zorn, K
Casey, W
Kleinstreuer, N
Chimie de la matière complexe (CMC)
Université de Strasbourg (UNISTRA)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
Source :
Environmental Health Perspectives, Environmental Health Perspectives, National Institute of Environmental Health Sciences, 2021, 129 (4), pp.047013. ⟨10.1289/EHP8495⟩
Publication Year :
2021
Publisher :
Environmental Health Perspectives, 2021.

Abstract

BACKGROUND: Humans are exposed to tens of thousands of chemical substances that need to be assessed for their potential toxicity. Acute systemic toxicity testing serves as the basis for regulatory hazard classification, labeling, and risk management. However, it is cost- and time-prohibitive to evaluate all new and existing chemicals using traditional rodent acute toxicity tests. In silico models built using existing data facilitate rapid acute toxicity predictions without using animals. OBJECTIVES: The U.S. Interagency Coordinating Committee on the Validation of Alternative Methods (ICCVAM) Acute Toxicity Workgroup organized an international collaboration to develop in silico models for predicting acute oral toxicity based on five different end points: Lethal Dose 50 (LD50 value, U.S. Environmental Protection Agency hazard (four) categories, Globally Harmonized System for Classification and Labeling hazard (five) categories, very toxic chemicals [LD50 (LD50≤50mg/kg)], and nontoxic chemicals (LD50>2,000mg/kg). METHODS: An acute oral toxicity data inventory for 11,992 chemicals was compiled, split into training and evaluation sets, and made available to 35 participating international research groups that submitted a total of 139 predictive models. Predictions that fell within the applicability domains of the submitted models were evaluated using external validation sets. These were then combined into consensus models to leverage strengths of individual approaches. RESULTS: The resulting consensus predictions, which leverage the collective strengths of each individual model, form the Collaborative Acute Toxicity Modeling Suite (CATMoS). CATMoS demonstrated high performance in terms of accuracy and robustness when compared with in vivo results. DISCUSSION: CATMoS is being evaluated by regulatory agencies for its utility and applicability as a potential replacement for in vivo rat acute oral toxicity studies. CATMoS predictions for more than 800,000 chemicals have been made available via the National Toxicology Program's Integrated Chemical Environment tools and data sets (ice.ntp.niehs.nih.gov). The models are also implemented in a free, standalone, open-source tool, OPERA, which allows predictions of new and untested chemicals to be made. https://doi.org/10.1289/EHP8495.

Details

ISSN :
00916765 and 15529924
Database :
OpenAIRE
Journal :
Environmental Health Perspectives, Environmental Health Perspectives, National Institute of Environmental Health Sciences, 2021, 129 (4), pp.047013. ⟨10.1289/EHP8495⟩
Accession number :
edsair.doi.dedup.....6f10be9a3f401d14e1b5653e1242ab66
Full Text :
https://doi.org/10.1289/EHP8495⟩