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Genomic sequencing of a strain of Acinetobacter baumannii and potential mechanisms to antibiotics resistance
- Source :
- Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases. 50
- Publication Year :
- 2016
-
Abstract
- Acinetobacter baumannii has been becoming a great challenge to clinicians due to their resistance to almost all available antibiotics. In this study, we sequenced the genome from a multiple antibiotics resistant Acinetobacter baumannii stain which was named A. baumannii-1isolated from China by SMRT sequencing technology to explore its potential mechanisms to antibiotic resistance. We found that several mechanisms might contribute to the antibiotic resistance of Acinetobacter baumannii. Specifically, we found that SNP in genes associated with nucleotide excision repair and ABC transporter might contribute to its resistance to multiple antibiotics; we also found that specific genes associated with bacterial DNA integration and recombination, DNA-mediated transposition and response to antibiotics might contribute to its resistance to multiple antibiotics; Furthermore, specific genes associated with penicillin and cephalosporin biosynthetic pathway and specific genes associated with CHDL and MBL β-lactamase genes might contribute to its resistance to multiple antibiotics. Thus, the detailed mechanisms by which Acinetobacter baumannii show extensive resistance to multiple antibiotics are very complicated. Such a study might be helpful to develop new strategies to control Acinetobacter baumannii infection.
- Subjects :
- 0301 basic medicine
Microbiology (medical)
Acinetobacter baumannii
DNA, Bacterial
DNA Repair
medicine.drug_class
030106 microbiology
Antibiotics
Cephalosporin
Gene Expression
ATP-binding cassette transporter
Microbial Sensitivity Tests
Microbiology
Genome
Polymorphism, Single Nucleotide
beta-Lactamases
03 medical and health sciences
Antibiotic resistance
INDEL Mutation
Drug Resistance, Multiple, Bacterial
RNA, Ribosomal, 16S
Genetics
medicine
Humans
Molecular Biology
Ecology, Evolution, Behavior and Systematics
Phylogeny
biology
Base Sequence
Sequence Analysis, DNA
biochemical phenomena, metabolism, and nutrition
Middle Aged
bacterial infections and mycoses
biology.organism_classification
Anti-Bacterial Agents
Penicillin
030104 developmental biology
Infectious Diseases
Carbapenems
ATP-Binding Cassette Transporters
Female
Bacteria
Genome, Bacterial
medicine.drug
Acinetobacter Infections
Subjects
Details
- ISSN :
- 15677257
- Volume :
- 50
- Database :
- OpenAIRE
- Journal :
- Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
- Accession number :
- edsair.doi.dedup.....70ce2c1b622ac83bc877fad73aabad36