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Prolactin-Releasing Peptide Differentially Regulates Gene Transcriptomic Profiles in Mouse Bone Marrow-Derived Macrophages
- Source :
- International Journal of Molecular Sciences, International Journal of Molecular Sciences, Vol 22, Iss 4456, p 4456 (2021), Volume 22, Issue 9
- Publication Year :
- 2021
-
Abstract
- Prolactin-releasing Peptide (PrRP) is a neuropeptide whose receptor is GPR10. Recently, the regulatory role of PrRP in the neuroendocrine field has attracted increasing attention. However, the influence of PrRP on macrophages, the critical housekeeper in the neuroendocrine field, has not yet been fully elucidated. Here, we investigated the effect of PrRP on the transcriptome of mouse bone marrow-derived macrophages (BMDMs) with RNA sequencing, bioinformatics, and molecular simulation. BMDMs were exposed to PrRP (18 h) and were subjected to RNA sequencing. Differentially expressed genes (DEGs) were acquired, followed by GO, KEGG, and PPI analysis. Eight qPCR-validated DEGs were chosen as hub genes. Next, the three-dimensional structures of the proteins encoded by these hub genes were modeled by Rosetta and Modeller, followed by molecular dynamics simulation by the Gromacs program. Finally, the binding modes between PrRP and hub proteins were investigated with the Rosetta program. PrRP showed no noticeable effect on the morphology of macrophages. A total of 410 DEGs were acquired, and PrRP regulated multiple BMDM-mediated functional pathways. Besides, the possible docking modes between PrRP and hub proteins were investigated. Moreover, GPR10 was expressed on the cell membrane of BMDMs, which increased after PrRP exposure. Collectively, PrRP significantly changed the transcriptome profile of BMDMs, implying that PrRP may be involved in various physiological activities mastered by macrophages.
- Subjects :
- Male
GPR10
QH301-705.5
Prolactin-releasing peptide
Neuropeptide
Bone marrow-derived macrophage
Biology
Catalysis
Article
prolactin-releasing peptide
Inorganic Chemistry
Transcriptome
Mice
Animals
Biology (General)
Physical and Theoretical Chemistry
KEGG
Receptor
QD1-999
Molecular Biology
Gene
Spectroscopy
Prolactin-Releasing Hormone
Macrophages
Organic Chemistry
RNA
Computational Biology
RNA sequencing
General Medicine
bioinformatics
bone marrow-derived macrophage
Computer Science Applications
Cell biology
Mice, Inbred C57BL
Chemistry
Gene Expression Regulation
transcriptomic profiles
Subjects
Details
- ISSN :
- 14220067
- Volume :
- 22
- Issue :
- 9
- Database :
- OpenAIRE
- Journal :
- International journal of molecular sciences
- Accession number :
- edsair.doi.dedup.....74af8706bfc8b72883775a9bba4b6d9d