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Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11T)
- Source :
- Standards in Genomic Sciences
- Publication Year :
- 2013
- Publisher :
- Springer Science and Business Media LLC, 2013.
-
Abstract
- Labrenzia alexandrii Biebl et al. 2007 is a marine member of the family Rhodobacteraceae in the order Rhodobacterales, which has thus far only partially been characterized at the genome level. The bacterium is of interest because it lives in close association with the toxic dinoflagellate Alexandrium lusitanicum. Ultrastructural analysis reveals R-bodies within the bacterial cells, which are primarily known from obligate endosymbionts that trigger "killing traits" in ciliates (Paramecium spp.). Genomic traits of L. alexandrii DFL-11(T) are in accordance with these findings, as they include the reb genes putatively involved in R-body synthesis. Analysis of the two extrachromosomal elements suggests a role in heavy-metal resistance and exopolysaccharide formation, respectively. The 5,461,856 bp long genome with its 5,071 protein-coding and 73 RNA genes consists of one chromosome and two plasmids, and has been sequenced in the context of the Marine Microbial Initiative.
- Subjects :
- Context (language use)
Biology
Genome
aerobe
03 medical and health sciences
Plasmid
Extrachromosomal DNA
Genetics
14. Life underwater
Paramecium
Gene
Alphaproteobacteria
030304 developmental biology
0303 health sciences
Obligate
030306 microbiology
Dinoflagellate
photoheterotroph
biology.organism_classification
symbiosis
Short Genome Reports
Alexandrium lusitanicum
motile
dinoflagellates
high-quality draft
Subjects
Details
- ISSN :
- 19443277
- Volume :
- 7
- Database :
- OpenAIRE
- Journal :
- Standards in Genomic Sciences
- Accession number :
- edsair.doi.dedup.....759b3a1c7f80f97c1373d2cffcc4fd4c
- Full Text :
- https://doi.org/10.4056/sigs.3456959