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Genome sequence of the cardiopulmonary canid nematode Angiostrongylus vasorum reveals species-specific genes with potential involvement in coagulopathy
- Publication Year :
- 2021
-
Abstract
- Angiostrongylus vasorum is an emerging parasitic nematode of canids and causes respiratory distress, bleeding, and other signs in dogs. Despite its clinical importance, the molecular toolbox allowing the study of the parasite is incomplete. To address this gap, we have sequenced its nuclear genome using Oxford nanopore sequencing, polished with Illumina reads. The size of the final genome is 280 Mb comprising 468 contigs , with an N50 value of 1.68 Mb and a BUSCO score of 93.5%. Ninety-three percent of 13,766 predicted genes were assigned to putative functions. Three folate carriers were found exclusively in A. vasorum , with potential involvement in host coagulopathy . A screen for previously identified vaccine candidates, the aminopeptidase H11 and the somatic protein rHc23, revealed homologs in A. vasorum. The genome sequence will provide a foundation for the development of new tools against canine angiostrongylosis, supporting the identification of potential drug and vaccine targets.
- Subjects :
- 0106 biological sciences
10078 Institute of Parasitology
Nuclear gene
Angiostrongylus vasorum
610 Medicine & health
01 natural sciences
Genome
03 medical and health sciences
Dogs
1311 Genetics
600 Technology
Genetics
Animals
Angiostrongylus
Gene
030304 developmental biology
Strongylida Infections
Whole genome sequencing
0303 health sciences
biology
Contig
Heart
biology.organism_classification
3. Good health
Nematode
570 Life sciences
Nanopore sequencing
010606 plant biology & botany
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....7959a028807dd1bc1e1521d921e048ec