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An Expressed Sequence Tag collection from the male antennae of the Noctuid moth Spodoptera littoralis: a resource for olfactory and pheromone detection research
- Source :
- BMC Genomics, BMC Genomics, 2011, 12 (86), pp.86. ⟨10.1186/1471-2164-12-86⟩, BMC Genomics 86 (12), 1-18. (2011), BMC Genomics, BioMed Central, 2011, 12, pp.86. ⟨10.1186/1471-2164-12-86⟩, BMC Genomics, Vol 12, Iss 1, p 86 (2011), BMC Genomics, BioMed Central, 2011, 12, pp.86. 〈10.1186/1471-2164-12-86〉, BMC Genomics, BioMed Central, 2011, 12 (86), pp.86. ⟨10.1186/1471-2164-12-86⟩
- Publication Year :
- 2011
- Publisher :
- HAL CCSD, 2011.
-
Abstract
- Background Nocturnal insects such as moths are ideal models to study the molecular bases of olfaction that they use, among examples, for the detection of mating partners and host plants. Knowing how an odour generates a neuronal signal in insect antennae is crucial for understanding the physiological bases of olfaction, and also could lead to the identification of original targets for the development of olfactory-based control strategies against herbivorous moth pests. Here, we describe an Expressed Sequence Tag (EST) project to characterize the antennal transcriptome of the noctuid pest model, Spodoptera littoralis, and to identify candidate genes involved in odour/pheromone detection. Results By targeting cDNAs from male antennae, we biased gene discovery towards genes potentially involved in male olfaction, including pheromone reception. A total of 20760 ESTs were obtained from a normalized library and were assembled in 9033 unigenes. 6530 were annotated based on BLAST analyses and gene prediction software identified 6738 ORFs. The unigenes were compared to the Bombyx mori proteome and to ESTs derived from Lepidoptera transcriptome projects. We identified a large number of candidate genes involved in odour and pheromone detection and turnover, including 31 candidate chemosensory receptor genes, but also genes potentially involved in olfactory modulation. Conclusions Our project has generated a large collection of antennal transcripts from a Lepidoptera. The normalization process, allowing enrichment in low abundant genes, proved to be particularly relevant to identify chemosensory receptors in a species for which no genomic data are available. Our results also suggest that olfactory modulation can take place at the level of the antennae itself. These EST resources will be invaluable for exploring the mechanisms of olfaction and pheromone detection in S. littoralis, and for ultimately identifying original targets to fight against moth herbivorous pests.
- Subjects :
- Male
MESH: Sequence Analysis, DNA
[ SDV.AEN ] Life Sciences [q-bio]/Food and Nutrition
MESH : Arthropod Antennae
détection olfactive
MESH : Molecular Sequence Annotation
Genes, Insect
Insect
MESH: Genes, Insect
MESH : Pheromones
Pheromones
0302 clinical medicine
Arthropod Antennae
Databases, Genetic
MESH: Smell
MESH: Animals
MESH: Phylogeny
Phylogeny
MESH: Databases, Genetic
media_common
Expressed Sequence Tags
0303 health sciences
Expressed sequence tag
MESH: Pheromones
noctuelle
MESH: Spodoptera
MESH : Expressed Sequence Tags
MESH : Genes, Insect
food and beverages
Smell
Sex pheromone
Pheromone
Biotechnology
Research Article
papillon de nuit
lcsh:QH426-470
MESH : Male
lcsh:Biotechnology
media_common.quotation_subject
Gene prediction
Olfaction
Computational biology
MESH: Molecular Sequence Annotation
Biology
Spodoptera
MESH : Spodoptera
MESH: Expressed Sequence Tags
03 medical and health sciences
MESH: Gene Expression Profiling
lcsh:TP248.13-248.65
Botany
MESH: Gene Library
Genetics
Animals
MESH : Databases, Genetic
Spodoptera littoralis
030304 developmental biology
Gene Library
MESH: Arthropod Antennae
MESH : Gene Expression Profiling
Gene Expression Profiling
séquence génomique
fungi
MESH : Phylogeny
Molecular Sequence Annotation
Sequence Analysis, DNA
MESH : Gene Library
biology.organism_classification
MESH: Male
lcsh:Genetics
MESH : Smell
MESH : Animals
[SDV.AEN]Life Sciences [q-bio]/Food and Nutrition
030217 neurology & neurosurgery
MESH : Sequence Analysis, DNA
Subjects
Details
- Language :
- English
- ISSN :
- 14712164
- Database :
- OpenAIRE
- Journal :
- BMC Genomics, BMC Genomics, 2011, 12 (86), pp.86. ⟨10.1186/1471-2164-12-86⟩, BMC Genomics 86 (12), 1-18. (2011), BMC Genomics, BioMed Central, 2011, 12, pp.86. ⟨10.1186/1471-2164-12-86⟩, BMC Genomics, Vol 12, Iss 1, p 86 (2011), BMC Genomics, BioMed Central, 2011, 12, pp.86. 〈10.1186/1471-2164-12-86〉, BMC Genomics, BioMed Central, 2011, 12 (86), pp.86. ⟨10.1186/1471-2164-12-86⟩
- Accession number :
- edsair.doi.dedup.....7b69fa13bc91506540a056a8b9f66173
- Full Text :
- https://doi.org/10.1186/1471-2164-12-86⟩