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Alpha-1 antitrypsin Pi*Z gene frequency and Pi*ZZ genotype numbers worldwide: an update
- Source :
- International Journal of Chronic Obstructive Pulmonary Disease, Scientia, Dipòsit Digital de la UB, Universidad de Barcelona
- Publication Year :
- 2017
-
Abstract
- Ignacio Blanco,1 Patricia Bueno,2 Isidro Diego,3 Sergio Pérez-Holanda,4 Francisco Casas-Maldonado,5 Cristina Esquinas,6 Marc Miravitlles6,7 1Alpha1-Antitrypsin Deficiency Spanish Registry (REDAAT), Fundación Respira, Spanish Society of Pneumology and Thoracic Surgery (SEPAR), Barcelona, 2Internal Medicine Department, County Hospital of Jarrio, 3Materials and Energy Department, School of Mining Engineering, Oviedo University, 4Surgical Department, University Central Hospital of Asturias (HUCA), Oviedo, Principality of Asturias, 5Pneumology Department, Complejo Hospitalario Universitario de Granada, Granada, 6Pneumology Department, Hospital Universitari Vall d’Hebron, 7CIBER de Enfermedades Respiratorias (CIBERES), Barcelona, Spain Abstract: In alpha-1 antitrypsin deficiency (AATD), the Z allele is present in 98% of cases with severe disease, and knowledge of the frequency of this allele is essential from a public health perspective. However, there is a remarkable lack of epidemiological data on AATD worldwide, and many of the data currently used are outdated. Therefore, the objective of this study was to update the knowledge of the frequency of the Z allele to achieve accurate estimates of the prevalence and number of Pi*ZZ genotypes worldwide based on studies performed according to the following criteria: 1) samples representative of the general population, 2) AAT phenotyping characterized by adequate methods, and 3) measurements performed using a coefficient of variation calculated from the sample size and 95% confidence intervals. Studies fulfilling these criteria were used to develop maps with an inverse distance weighted (IDW)-interpolation method, providing numerical and graphical information of Pi*Z distribution worldwide. A total of 224 cohorts from 65 countries were included in the study. With the data provided by these cohorts, a total of 253,404 Pi*ZZ were estimated worldwide: 119,594 in Europe, 91,490 in America and Caribbean, 3,824 in Africa, 32,154 in Asia, 4,126 in Australia, and 2,216 in New Zealand. In addition, the IDW-interpolation maps predicted Pi*Z frequencies throughout the world even in some areas that lack real data. In conclusion, the inclusion of new well-designed studies and the exclusion of the low-quality ones have significantly improved the reliability of results, which may be useful to plan strategies for future research and diagnosis and to rationalize the therapeutic resources available. Keywords: SERPINA1, alpha-1 antitrypsin deficiency, protease inhibitor, genetic epidemiology, inverse distance weighted interpolation, geographic information system
- Subjects :
- Nueva Zelanda
Global Health
Geographical Locations::Geographic Locations::Islands::Pacific Islands::New Zealand [Medical Subject Headings]
Analytical, Diagnostic and Therapeutic Techniques and Equipment::Investigative Techniques::Epidemiologic Methods::Statistics as Topic::Confidence Intervals [Medical Subject Headings]
Alfa 1-antitripsina
Epidemiologia genètica
0302 clinical medicine
epidemiología y bioestadística::epidemiología::estudios epidemiológicos::epidemiología molecular [SALUD PÚBLICA]
Gene Frequency
Health Care::Environment and Public Health::Public Health [Medical Subject Headings]
Epidemiology
Statistics
Genotype
Malalties hereditàries
Prevalence
Genetic epidemiology
geographic information system
Analytical, Diagnostic and Therapeutic Techniques and Equipment::Investigative Techniques::Epidemiologic Methods::Data Collection::Vital Statistics::Morbidity::Prevalence [Medical Subject Headings]
Original Research
alpha-1 antitrypsin deficiency
education.field_of_study
Molecular Epidemiology
Inverse distance weighted interpolation
Enzyme inhibitors
Deficiencia de alfa 1-antitripsina
General Medicine
Geographic information systems
Analytical, Diagnostic and Therapeutic Techniques and Equipment::Investigative Techniques::Epidemiologic Methods::Epidemiologic Research Design::Reproducibility of Results [Medical Subject Headings]
Phenotype
Alpha-1 antitrypsin deficiency
030220 oncology & carcinogenesis
SERPINA1
Phenomena and Processes::Genetic Phenomena::Genotype [Medical Subject Headings]
Alelos
Geographic information system
Genetic diseases
medicine.medical_specialty
genetic epidemiology
Analytical, Diagnostic and Therapeutic Techniques and Equipment::Investigative Techniques::Epidemiologic Methods::Epidemiologic Research Design::Sample Size [Medical Subject Headings]
Geographical Locations::Geographic Locations::Africa [Medical Subject Headings]
Epidemiologia molecular
Population
Alpha (ethology)
International Journal of Chronic Obstructive Pulmonary Disease
Salud Pública
protease inhibitor
03 medical and health sciences
Región del Caribe
enfermedades respiratorias::enfermedades pulmonares::deficiencia de alfa 1-antitripsina [ENFERMEDADES]
alpha 1-Antitrypsin Deficiency
medicine
Humans
Europa (Continente)
Genetic Predisposition to Disease
Respiratory Tract Diseases::Lung Diseases::alpha 1-Antitrypsin Deficiency [DISEASES]
Geographical Locations::Geographic Locations::Asia [Medical Subject Headings]
Allele
education
Allele frequency
Phenomena and Processes::Genetic Phenomena::Genetic Structures::Genome::Genome Components::Genes::Alleles [Medical Subject Headings]
Diseases::Congenital, Hereditary, and Neonatal Diseases and Abnormalities::Genetic Diseases, Inborn::alpha 1-Antitrypsin Deficiency [Medical Subject Headings]
Epidemiology and Biostatistics::Epidemiology::Epidemiologic Studies::Molecular Epidemiology [PUBLIC HEALTH]
Sistemes d'informació geogràfica
África
Intervalos de confianza
Models, Genetic
Reproducibilidad de resultados
business.industry
Geographical Locations::Geographic Locations::Australia [Medical Subject Headings]
Geographical Locations::Geographic Locations::Americas::Caribbean Region [Medical Subject Headings]
inverse distance weighted interpolation
Tamaño de la Muestra
Confidence interval
Genetics, Population
Inhibidors enzimàtics
Protease inhibitor
030228 respiratory system
Sample size determination
alpha 1-Antitrypsin
Mutation
Geographical Locations::Geographic Locations::Europe [Medical Subject Headings]
Prevalencia
business
Genotipo
Subjects
Details
- ISSN :
- 11782005
- Volume :
- 12
- Database :
- OpenAIRE
- Journal :
- International journal of chronic obstructive pulmonary disease
- Accession number :
- edsair.doi.dedup.....7ef5355e554a089baad3e0cee4ec003c