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Multivariate genomic scan implicates novel loci and haem metabolism in human ageing

Authors :
Joris Deelen
James F. Wilson
Peter K. Joshi
Paul R. H. J. Timmers
Source :
Timmers, P R H J, Wilson, J, Joshi, P & Deelen, J 2020, ' Multivariate genomic scan implicates novel loci and haem metabolism in human ageing ', Nature Communications, vol. 11, no. 1, pp. 3570 . https://doi.org/10.1038/s41467-020-17312-3, Nature Communications, Vol 11, Iss 1, Pp 1-10 (2020), Nature Communications, Nat Commun
Publication Year :
2020

Abstract

Ageing phenotypes, such as years lived in good health (healthspan), total years lived (lifespan), and survival until an exceptional old age (longevity), are of interest to us all but require exceptionally large sample sizes to study genetically. Here we combine existing genome-wide association summary statistics for healthspan, parental lifespan, and longevity in a multivariate framework, increasing statistical power, and identify 10 genomic loci which influence all three phenotypes, of which five (near FOXO3, SLC4A7, LINC02513, ZW10, and FGD6) have not been reported previously at genome-wide significance. The majority of these 10 loci are associated with cardiovascular disease and some affect the expression of genes known to change their activity with age. In total, we implicate 78 genes, and find these to be enriched for ageing pathways previously highlighted in model organisms, such as the response to DNA damage, apoptosis, and homeostasis. Finally, we identify a pathway worthy of further study: haem metabolism.<br />Ageing phenotypes are of great interest but are difficult to study genetically, partly due to the sample sizes required. Here, the authors present a multivariate framework to combine GWAS summary statistics and increase statistical power, identifying additional loci enriched for aging.

Details

Language :
English
Database :
OpenAIRE
Journal :
Timmers, P R H J, Wilson, J, Joshi, P & Deelen, J 2020, ' Multivariate genomic scan implicates novel loci and haem metabolism in human ageing ', Nature Communications, vol. 11, no. 1, pp. 3570 . https://doi.org/10.1038/s41467-020-17312-3, Nature Communications, Vol 11, Iss 1, Pp 1-10 (2020), Nature Communications, Nat Commun
Accession number :
edsair.doi.dedup.....7f635883db49f01b4cc2f489db52e464
Full Text :
https://doi.org/10.1038/s41467-020-17312-3