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Carbon utilization profiles of Fusarium virguliforme isolates
- Source :
- Canadian Journal of Microbiology. 56:979-986
- Publication Year :
- 2010
- Publisher :
- Canadian Science Publishing, 2010.
-
Abstract
- Fusarium virguliforme is the cause of sudden death syndrome in soybean. Physiological variability among isolates of the fungus is unknown. One way to measure physiologic variability is to analyze growth on different carbon sources. The carbon source utilization profiles of 18 F. virguliforme isolates were examined using the Biolog FF 96-well microplate, which contains 95 different carbon sources. The utilization of dextrin, d-mannitol, maltotriose, d-lactic acid methyl ester, N-acetyl-d-galactosamine, salicin, d-trehalose, and l-alanine differed significantly among isolates (P = 0.05). Carbon sources were grouped into 3 clusters based on their ability to promote growth of F. virguliforme, after calculating Euclidean distances among them. About 12% of the carbon sources promoted a high amount of mycelial growth, 39% promoted a medium amount of growth, and 49% promoted a low amount of mycelial growth; the latter was not significantly different from the water blank control. A hierarchical tree diagram was produced for the 18 isolates based on their carbon source utilization profiles using Ward’s hierarchical analysis method. Two main clusters of isolates were formed. One cluster represented greater average mycelial growth on all of the carbon sources than the other cluster. In this study, variability in carbon source utilization among F. virguliforme isolates was evident, but the results were not associated with geographic origin of the isolates, year collected, or published data on aggressiveness. Additional research is needed to determine if these carbon utilization profiles are associated with other biological characteristics, like spore germination, propagule formation, and saprophytic competitiveness.
- Subjects :
- Fusarium
Acetylgalactosamine
Immunology
chemistry.chemical_element
Fungus
Applied Microbiology and Biotechnology
Microbiology
Carbon utilization
chemistry.chemical_compound
Salicin
Botany
Genetics
Spore germination
Cluster Analysis
Mannitol
Molecular Biology
Mycelium
Alanine
biology
Esters
General Medicine
Fungi imperfecti
biology.organism_classification
Carbon
Horticulture
chemistry
Carbohydrate Metabolism
Soybeans
Subjects
Details
- ISSN :
- 14803275 and 00084166
- Volume :
- 56
- Database :
- OpenAIRE
- Journal :
- Canadian Journal of Microbiology
- Accession number :
- edsair.doi.dedup.....86b56d2a75af4c6e261814561feb9526
- Full Text :
- https://doi.org/10.1139/w10-085