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WITHDRAWN:Genetic diversity and effect of selection at the mitochondrial hypervariable region in major Nigerian indigenous goat breeds
- Source :
- Asian-Australasian journal of animal sciences.
- Publication Year :
- 2015
-
Abstract
- Mitochondrial DNA (mtDNA) hypervariable region 1 ( HV1) sequences of three Nigerian indigenous goat breeds; West African Dwarf (WAD), Red Sokoto (RS) and Sahel were used to investigate the genetic diversity and effect of selection between and among these populations. Deoxyribonucleic acid (DNA) of Nigerian indigenous chicken was extracted from blood samples collected and preserved on Fast Technology for Analysis (FTA) paper. The extracted DNA were amplified and sequenced with predefined mitochondria (mtDNA) primer sets for HV1. Eighty-seven (87) polymorphic sites were found in 115 sequences which were grouped into 92 haplotypes. The mean haplotypic and nucleotide diversity were found to be 0.996±0.002 and 0.092±0.04 respectively. Genetic variation within population and between populations accounted for 97.26% and 2.74% of the total maternal variation respectively, with FST value of 0.0274. The Tajima's (D) and Fu's (F) test of neutrality were significant (P
- Subjects :
- 0301 basic medicine
Genetics
Veterinary medicine
education.field_of_study
Genetic diversity
Mitochondrial DNA
Population
Haplotype
Biology
Nucleotide diversity
Hypervariable region
03 medical and health sciences
030104 developmental biology
Genetic distance
Genetic variation
Animal Science and Zoology
education
Food Science
Subjects
Details
- ISSN :
- 10112367
- Database :
- OpenAIRE
- Journal :
- Asian-Australasian journal of animal sciences
- Accession number :
- edsair.doi.dedup.....8b2db35687dcf248552c12312612ccf2