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Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma

Authors :
Lenka Foretova
Sophia S. Wang
Hans-Olov Adami
Demetrius Albanes
Andrew D. Zelenetz
Emanuele Angelucci
Paige M. Bracci
Hervé Tilly
Hervé Ghesquières
John J. Spinelli
Kimberly A. Bertrand
Francine Laden
Rebecca D. Jackson
Wendy Cozen
Anne J. Novak
Charles C. Chung
Meredith Yeager
Brian C.-H. Chiu
Jenny Turner
Melissa C. Southey
Gianluca Severi
Simonetta Di Lollo
Lindsay M. Morton
Mark Liebow
Theodore R. Holford
Paolo Boffetta
Paul I.W. de Bakker
Joseph Vijai
Claire M. Vajdic
Anne Kricker
Mark P. Purdue
Stephanie J. Weinstein
Ahmet Dogan
Alain Monnereau
Patricia Hartge
Degui Zhi
Amy K. Hutchinson
Brenda M. Birmann
Charles Lawrence
Elizabeth A. Holly
Marco Rais
Anneclaire J. De Roos
Karin E. Smedby
Sonja I. Berndt
Stephen J. Chanock
Lucia Conde
Stephen M. Ansell
Yan W. Asmann
Yuanqing Ye
David G. Cox
Elio Riboli
Joseph F. Fraumeni
Christine F. Skibola
Christopher R. Flowers
Angela Brooks-Wilson
Amelie S. Veron
Jarmo Virtamo
Danylo J. Villano
Thierry Jo Molina
W. Ryan Diver
James D. McKay
Kenneth Offit
Eve Roman
Jinyan Huang
Xifeng Wu
Marc Maynadie
Yolanda Benavente
Baoshan Ma
Brian K. Link
Thomas E. Witzig
Mads Melbye
George J. Weiner
Zhaoming Wang
Corinne Haioun
Alex Smith
Anthony Staines
Anne Zeleniuch-Jacquotte
Martyn T. Smith
Paul Brennan
Nilanjan Chatterjee
Tracy Lightfoot
Eleanor Kane
Bengt Glimelius
Ju-Hyun Park
Robert J. Klein
Alexandra Nieters
Heiner Boeing
Mariagrazia Zucca
Nathaniel Rothman
Jacqueline Clavel
Qing Lan
Susan L. Slager
Rudolph Kaaks
Diana Zelenika
Nikolaus Becker
Henrik Hjalgrim
Rachel S. Kelly
Roel Vermeulen
Graham G. Giles
Anne Tjønneland
Carrie A. Thompson
Laurie Burdett
Richard K. Severson
Dimitrios Trichopoulos
Yawei Zhang
Kari E. North
Tongzhang Zheng
Jian Gu
Edward Giovannucci
Jacques Riby
Simon Crouch
Gilles Salles
Silvia de Sanjosé
Dennis D. Weisenburger
Thomas M. Habermann
Paolo Vineis
Lesley F. Tinker
Joshua N. Sampson
Liming Liang
Peter Kraft
James R. Cerhan
Lauren R. Teras
Cerhan, J.R.
Berndt, S.I.
Vijai, J.
Ghesquières, H.
McKay, J.
Wang, S.S.
Wang, Z.
Yeager, M.
Conde, L.
De Bakker, P.I.W.
Nieters, A.
Cox, D.
Burdett, L.
Monnereau, A.
Flowers, C.R.
De Roos, A.J.
Brooks-Wilson, A.R.
Lan, Q.
Severi, G.
Melbye, M.
Gu, J.
Jackson, R.D.
Kane, E.
Teras, L.R.
Purdue, M.P.
Vajdic, C.M.
Spinelli, J.J.
Giles, G.G.
Albanes, D.
Kelly, R.S.
Zucca, M.
Bertrand, K.A.
Zeleniuch-Jacquotte, A.
Lawrence, C.
Hutchinson, A.
Zhi, D.
Habermann, T.M.
Link, B.K.
Novak, A.J.
Dogan, A.
Asmann, Y.W.
Liebow, M.
Thompson, C.A.
Ansell, S.M.
Witzig, T.E.
Weiner, G.J.
Veron, A.S.
Zelenika, D.
Tilly, H.
Haioun, C.
Molina, T.J.
Hjalgrim, H.
Glimelius, B.
Adami, H.-O.
Bracci, P.M.
Riby, J.
Smith, M.T.
Holly, E.A.
Cozen, W.
Hartge, P.
Morton, L.M.
Severson, R.K.
Tinker, L.F.
North, K.E.
Becker, N.
Benavente, Y.
Boffetta, P.
Brennan, P.
Foretova, L.
Maynadie, M.
Staines, A.
Lightfoot, T.
Crouch, S.
Smith, A.
Roman, E.
Diver, W.R.
Offit, K.
Zelenetz, A.
Klein, R.J.
Villano, D.J.
Zheng, T.
Zhang, Y.
Holford, T.R.
Kricker, A.
Turner, J.
Southey, M.C.
Clavel, J.
Virtamo, J.
Weinstein, S.
Riboli, E.
Vineis, P.
Kaaks, R.
Trichopoulos, D.
Vermeulen, R.C.H.
Boeing, H.
Tjonneland, A.
Angelucci, E.
Di Lollo, S.
Rais, M.
Birmann, B.M.
Laden, F.
Giovannucci, E.
Kraft, P.
Huang, J.
Ma, B.
Ye, Y.
Chiu, B.C.H.
Sampson, J.
Liang, L.
Park, J.-H.
Chung, C.C.
Weisenburger, D.D.
Chatterjee, N.
Fraumeni, J.F.
Slager, S.L.
Wu, X.
De Sanjose, S.
Smedby, K.E.
Salles, G.
Skibola, C.F.
Rothman, N.
Chanock, S.J.
Source :
Nature Genetics, 46(11), 1233. Nature Publishing Group, Dipòsit Digital de la UB, Universidad de Barcelona, Nature genetics
Publication Year :
2014

Abstract

Diffuse large B cell lymphoma (DLBCL) is the most common lymphoma subtype and is clinically aggressive. To identify genetic susceptibility loci for DLBCL, we conducted a meta-analysis of 3 new genome-wide association studies (GWAS) and 1 previous scan, totaling 3,857 cases and 7,666 controls of European ancestry, with additional genotyping of 9 promising SNPs in 1,359 cases and 4,557 controls. In our multi-stage analysis, five independent SNPs in four loci achieved genome-wide significance marked by rs116446171 at 6p25.3 (EXOC2; P = 2.33 × 10 '21), rs2523607 at 6p21.33 (HLA-B; P = 2.40 × 10 '10), rs79480871 at 2p23.3 (NCOA1; P = 4.23 × 10 '8) and two independent SNPs, rs13255292 and rs4733601, at 8q24.21 (PVT1; P = 9.98 × 10 '13 and 3.63 × 10 '11, respectively). These data provide substantial new evidence for genetic susceptibility to this B cell malignancy and point to pathways involved in immune recognition and immune function in the pathogenesis of DLBCL. © 2014 Nature America, Inc. All rights reserved.

Details

Language :
English
ISSN :
10614036
Database :
OpenAIRE
Journal :
Nature Genetics, 46(11), 1233. Nature Publishing Group, Dipòsit Digital de la UB, Universidad de Barcelona, Nature genetics
Accession number :
edsair.doi.dedup.....8dcf1dc2da0df61ac8b98a54fa46792c