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Common Genetic Polymorphisms within NFκB-Related Genes and the Risk of Developing Invasive Aspergillosis
- Source :
- Frontiers in Microbiology, Repositório Científico de Acesso Aberto de Portugal, Repositório Científico de Acesso Aberto de Portugal (RCAAP), instacron:RCAAP, Repositorio Institucional de la Consejería de Sanidad de la Comunidad de Madrid, Consejería de Sanidad de la Comunidad de Madrid, Frontiers in Microbiology, Vol 7 (2016), Repisalud, Instituto de Salud Carlos III (ISCIII)
- Publication Year :
- 2016
- Publisher :
- Frontiers Media, 2016.
-
Abstract
- Invasive Aspergillosis (IA) is an opportunistic infection caused by Aspergillus, a ubiquitously present airborne pathogenic mold. A growing number of studies suggest a major host genetic component in disease susceptibility. Here, we evaluated whether 14 single-nucleotide polymorphisms within NF kappa B1, NF kappa B2, RelA, RelB, Rel, and IRF4 genes influence the risk of IA in a population of 834 high-risk patients (157 IA and 677 non IA) recruited through a collaborative effort involving the aspBlOmics consortium and four European clinical institutions. No significant overall associations between selected SNPs and the risk of IA were found in this large cohort. Although a hematopoietic stem cell transplantation (HSCT)-stratified analysis revealed that carriers of the IRF4(rs12203592T/T) genotype had a six-fold increased risk of developing the infection when compared with those carrying the C allele (ORREC = 6.24, 95%CI 1.25-31.2, P = 0.026), the association of this variant with IA risk did not reach significance at experiment-wide significant threshold. In addition, we found an association of the IRF4(AATC) and IRF4(GGTC) haplotypes (not including the IRF4(rs12203592T/T) risk allele) with a decreased risk of IA but the magnitude of the association was similar to the one observed in the single-SNP analysis, which indicated that the haplotypic effect on IA risk was likely due to the IRF4(rs12203592) SNP Finally, no evidence of significant interactions among the genetic markers tested and the risk of IA was found. These results suggest that the SNPs on the studied genes do not have a clinically relevant impact on the risk of developing IA.<br />This study was supported by grants PI12/02688 from Fond de Investigaciones Sanitarias (Institute de Salud Carlos III, Madrid, Spain), the ERA-NET PathoGenoMics (03159000A; Ministerio de Ciencia e Innovation PIM2010EPA-00756, Madrid, Spain), the Collaborative Research Center / Transregio 124 FungiNet, the Austrian Science Fundation (FWF I-656-B09), the Fundacao para a Ciencia e Tecnologia (FCT), cofundcd by Programa Operacional Regional do Norte (ON.2-O Novo Norte), the Quadro de Referencia Estrategico Nacional (QREN) through the Fundo Europeu de Desenvolvimento Regional (FEDER) and the Projeto Estrategico - LA 26 - 2013-2014 (PEst-C/SAU/LA0026/2013). Agostinho Carvalho and Cristina Cunha were supported by the Fundacao para a e Tecnologia (FCT), Portugal (IF/00735/2014 and SFRH/BPD/96176/2013, respectively). The PCRAGA trial was supported by an unrestricted grant from Pfizer, which had no involvement or control over the collection, analysis, and interpretation of data; the writing of the report; or the decision to submit the paper for publication. This study was also supported by Astellas Pharma Inc. and a donation from Consuelo Gonzalez Moreno, an acute myeloid leukemia survivor.<br />info:eu-repo/semantics/publishedVersion
- Subjects :
- 0301 basic medicine
Polimorfismo de nucleótido simple
Medicina Básica [Ciências Médicas]
lcsh:QR1-502
Diseases::Bacterial Infections and Mycoses::Mycoses::Hyalohyphomycosis::Aspergillosis [Medical Subject Headings]
Genetic Susceptibility
NF kappa B-related genes
lcsh:Microbiology
susceptibility
Diseases::Bacterial Infections and Mycoses::Infection::Opportunistic Infections [Medical Subject Headings]
Phenomena and Processes::Genetic Phenomena::Genotype::Haplotypes [Medical Subject Headings]
Organisms::Eukaryota::Animals::Chordata::Vertebrates::Mammals::Primates::Haplorhini::Catarrhini::Hominidae::Humans [Medical Subject Headings]
Infecciones oportunistas
Invasive Aspergillosis
NFκB-related genes
genetic polymorphisms
interaction
Diseases::Pathological Conditions, Signs and Symptoms::Pathologic Processes::Disease Attributes::Disease Susceptibility [Medical Subject Headings]
Genotype
Chemicals and Drugs::Carbohydrates::Glycosides::Nucleotides [Medical Subject Headings]
Original Research
Genetics
education.field_of_study
Phenomena and Processes::Genetic Phenomena::Phenotype::Genetic Markers [Medical Subject Headings]
Analytical, Diagnostic and Therapeutic Techniques and Equipment::Surgical Procedures, Operative::Transplantation::Cell Transplantation::Stem Cell Transplantation::Hematopoietic Stem Cell Transplantation [Medical Subject Headings]
Humanos
3. Good health
Nucleótidos
Ciências Médicas::Medicina Básica
Haplotipos
Phenomena and Processes::Genetic Phenomena::Genotype [Medical Subject Headings]
Trasplante de células madre hematopoyéticas
Microbiology (medical)
Marcadores genéticos
nfkb pathway
Population
Single-nucleotide polymorphism
Biology
Microbiology
03 medical and health sciences
Genetic predisposition
SNP
ddc:610
Allele
education
Phenomena and Processes::Genetic Phenomena::Genetic Variation::Polymorphism, Genetic::Polymorphism, Single Nucleotide [Medical Subject Headings]
Science & Technology
Haplotype
Susceptibilidad a enfermedades
Organisms::Eukaryota::Fungi::Mitosporic Fungi::Aspergillus [Medical Subject Headings]
Hematologic Diseases
Settore MED/15 - MALATTIE DEL SANGUE
030104 developmental biology
Aspergilosis
Genetic marker
Invasive Aspergillosis, genetic polymorphisms, susceptibility, NFκB-related genes, interaction
Immunology
Genotipo
Stem Cell Transplantation
Subjects
Details
- Language :
- English
- ISSN :
- 03159000
- Database :
- OpenAIRE
- Journal :
- Frontiers in Microbiology, Repositório Científico de Acesso Aberto de Portugal, Repositório Científico de Acesso Aberto de Portugal (RCAAP), instacron:RCAAP, Repositorio Institucional de la Consejería de Sanidad de la Comunidad de Madrid, Consejería de Sanidad de la Comunidad de Madrid, Frontiers in Microbiology, Vol 7 (2016), Repisalud, Instituto de Salud Carlos III (ISCIII)
- Accession number :
- edsair.doi.dedup.....8e72d913ba0eceff44caaefe59cbeb99