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Community curation of bioinformatics software and data resources

Authors :: Ison, Jon
Ménager, Hervé
Brancotte, Bryan
Jaaniso, Erik
Salumets, Ahto
Raček, Tomáš
Lamprecht, Anna-Lena
Palmblad, Magnus
Kalaš, Matúš
Chmura, Piotr
Hancock, John M
Schwämmle, Veit
Ienasescu, Hans-Ioan
Sub Software Technology
Software Technology
Sub Software Technology
Software Technology
National Life Science Supercomputing Center [Kongens Lyngby, Denmark] (Computerome)
Danmarks Tekniske Universitet = Technical University of Denmark (DTU)
Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB
Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)
Institute of Computer Science [University of Tartu, Estonie]
University of Tartu
Central European Institute of Technology [Brno] (CEITEC MU)
Brno University of Technology [Brno] (BUT)
Faculty of Informatics [Brno] (FI / MUNI)
Masaryk University [Brno] (MUNI)
Department of Information and Computing Sciences [Utrecht]
Utrecht University [Utrecht]
Center for Proteomics and Metabolomics [Leiden] (CPM)
Leiden University Medical Center (LUMC)
Universiteit Leiden-Universiteit Leiden
Department of Informatics [Bergen] (UiB)
University of Bergen (UiB)
Novo Nordisk Foundation Center for Protein Research (CPR)
Faculty of Health and Medical Sciences
University of Copenhagen = Københavns Universitet (UCPH)-University of Copenhagen = Københavns Universitet (UCPH)
ELIXIR Hub [Cambridge]
University of Southern Denmark (SDU)
We acknowledge with gratitude the support of our funders: The Danish Ministry of Higher Education and Science and ELIXIR-EXCELERATE under the European Union’s Horizon 2020 research and innovation programme (grant agreement number 676559)
European Project: 676559,H2020,H2020-INFRADEV-1-2015-1,ELIXIR-EXCELERATE(2015)
Technical University of Denmark [Lyngby] (DTU)
Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)
University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU)
Source :: Ison, J, Ménager, H, Brancotte, B, Jaaniso, E, Salumets, A, Raček, T, Lamprecht, A L, Palmblad, M, Kalaš, M, Chmura, P, Hancock, J M, Schwämmle, V & Ienasescu, H I 2020, ' Community curation of bioinformatics software and data resources ', Briefings in Bioinformatics, vol. 21, no. 5, pp. 1697-1705 . https://doi.org/10.1093/bib/bbz075, Ison, J, Ménager, H, Brancotte, B, Jaaniso, E, Salumets, A, Raček, T, Lamprecht, A-L, Palmblad, M, Kalaš, M, Chmura, P, Hancock, J M, Schwämmle, V & Ienasescu, H-I 2020, ' Community curation of bioinformatics software and data resources ', Briefings in Bioinformatics, vol. 21, no. 5, pp. 1697-1705 . https://doi.org/10.1093/bib/bbz075, Briefings in Bioinformatics, Briefings in Bioinformatics, 21(5), 1697-1705. OXFORD UNIV PRESS, Briefings in Bioinformatics, 2019, pp.bbz075. ⟨10.1093/bib/bbz075⟩, Briefings in Bioinformatics. Oxford University Press, Ison, J, Ménager, H, Brancotte, B, Jaaniso, E, Salumets, A, Raček, T, Lamprecht, A-L, Palmblad, M, Kalaš, M, Chmura, P J, Hancock, J M, Schwämmle, V & Ioan Ienasescu, H 2020, ' Community curation of bioinformatics software and data resources ', Briefings in Bioinformatics, vol. 21, no. 5, pp. 1697–1705 . https://doi.org/10.1093/bib/bbz075, Briefings in Bioinformatics, Oxford University Press (OUP), 2019, pp.bbz075. ⟨10.1093/bib/bbz075⟩
Publication Year :: 2019
Abstract: The corpus of bioinformatics resources is huge and expanding rapidly, presenting life scientists with a growing challenge in selecting tools that fit the desired purpose. To address this, the European Infrastructure for Biological Information is supporting a systematic approach towards a comprehensive registry of tools and databases for all domains of bioinformatics, provided under a single portal (https://bio.tools). We describe here the practical means by which scientific communities, including individual developers and projects, through major service providers and research infrastructures, can describe their own bioinformatics resources and share these via bio.tools.

Details

Language :: English
ISSN :: 14675463 and 14774054
Database :: OpenAIRE
Journal :: Ison, J, Ménager, H, Brancotte, B, Jaaniso, E, Salumets, A, Raček, T, Lamprecht, A L, Palmblad, M, Kalaš, M, Chmura, P, Hancock, J M, Schwämmle, V & Ienasescu, H I 2020, ' Community curation of bioinformatics software and data resources ', Briefings in Bioinformatics, vol. 21, no. 5, pp. 1697-1705 . https://doi.org/10.1093/bib/bbz075, Ison, J, Ménager, H, Brancotte, B, Jaaniso, E, Salumets, A, Raček, T, Lamprecht, A-L, Palmblad, M, Kalaš, M, Chmura, P, Hancock, J M, Schwämmle, V & Ienasescu, H-I 2020, ' Community curation of bioinformatics software and data resources ', Briefings in Bioinformatics, vol. 21, no. 5, pp. 1697-1705 . https://doi.org/10.1093/bib/bbz075, Briefings in Bioinformatics, Briefings in Bioinformatics, 21(5), 1697-1705. OXFORD UNIV PRESS, Briefings in Bioinformatics, 2019, pp.bbz075. ⟨10.1093/bib/bbz075⟩, Briefings in Bioinformatics. Oxford University Press, Ison, J, Ménager, H, Brancotte, B, Jaaniso, E, Salumets, A, Raček, T, Lamprecht, A-L, Palmblad, M, Kalaš, M, Chmura, P J, Hancock, J M, Schwämmle, V & Ioan Ienasescu, H 2020, ' Community curation of bioinformatics software and data resources ', Briefings in Bioinformatics, vol. 21, no. 5, pp. 1697–1705 . https://doi.org/10.1093/bib/bbz075, Briefings in Bioinformatics, Oxford University Press (OUP), 2019, pp.bbz075. ⟨10.1093/bib/bbz075⟩
Accession number :: edsair.doi.dedup.....8f7d6b320866982801403fa2ae8e2439
Full Text :: https://doi.org/10.1093/bib/bbz075