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A certified plasmid reference material for the standardisation of BCR-ABL1 mRNA quantification by real-time quantitative PCR

Authors :
J M Cayuela
BJ Milner
Stéphane Mazoua
Elisabeth Oppliger Leibundgut
Linda Fletcher
Heike Pfeifer
Tomáš Jurček
E Gineikienė
P. Waits
Susanna Akiki
G Wilson
J Farrugia
H El Housni
Ugur Ozbek
D Wren
F. Lin
Tomasz Sacha
Hajnalka Andrikovics
S Chudleigh
Letizia Foroni
Stefanie Trapmann
Petra Johnels
Gareth Gerrard
Thomas Lion
M. Jansson
Katerina Zoi
Hendrik Emons
K. Raudsepp
Gisela Barbany
D A Nymoen
H Schimmel
J Ziermann
Nancy Boeckx
Mark Catherwood
Sandrine Hayette
G Romeo
Helen E. White
R Ganderton
Filomena Daraio
G. Mitterbauer-Hohendanner
Philippe Corbisier
Claude Preudhomme
Andreas Hochhaus
Martin C. Müller
P A Merle
V H J van der Velden
M Nagar
Victoria J. Hall
Lihui Wang
Theis Lange
Tim Clench
T Pajič
Stéphanie Dulucq
D-W Kim
Nicholas C.P. Cross
Josep F. Nomdedeu
Rodica Talmaci
Kateřina Machová Poláková
A Bench
Liesbet Deprez
T Touloumenidou
G Nickless
Veli Kairisto
Barbara Izzo
Dolors Colomer
Aytug Kizilors
Giovanni Martinelli
Renata Zadro
Anni Aggerholm
S McCarron
E Wilkinson
Hematology
CCA - Disease profiling
White, H
Deprez, L
Corbisier, P
Hall, V
Lin, F
Mazoua, S
Trapmann, S
Aggerholm, A
Andrikovics, H
Akiki, S
Barbany, G
Boeckx, N
Bench, A
Catherwood, M
Cayuela, Jm
Chudleigh, S
Clench, T
Colomer, D
Daraio, F
Dulucq, S
Farrugia, J
Fletcher, L
Foroni, L
Ganderton, R
Gerrard, G
Gineikienė, E
Hayette, S
El Housni, H
Izzo, Barbara
Jansson, M
Johnels, P
Jurcek, T
Kairisto, V
Kizilors, A
Kim, Dw
Lange, T
Lion, T
Polakova, Km
Martinelli, G
Mccarron, S
Merle, Pa
Milner, B
Mitterbauer Hohendanner, G
Nagar, M
Nickless, G
Nomdedéu, J
Nymoen, Da
Leibundgut, Eo
Ozbek, U
Pajič, T
Pfeifer, H
Preudhomme, C
Raudsepp, K
Romeo, G
Sacha, T
Talmaci, R
Touloumenidou, T
Van der Velden, Vh
Waits, P
Wang, L
Wilkinson, E
Wilson, G
Wren, D
Zadro, R
Ziermann, J
Zoi, K
Müller, Mc
Hochhaus, A
Schimmel, H
Cross, Nc
Emons, H.
Immunology
Radiology & Nuclear Medicine
Izzo, B
Mitterbauer-Hohendanner, G
Source :
Leukemia, 29(2), 369-376. Nature Publishing Group, Leukemia, White, H; Deprez, L; Corbisier, P; Hall, V; Lin, F; Mazoua, S; Trapmann, S; Aggerholm, A; Andrikovics, H; Akiki, S; Barbany, G; Boeckx, N; Bench, A; Catherwood, M; Cayuela, J-M; Chudleigh, S; Clench, T; Colomer, D; Daraio, F; Dulucq, S; ... (2015). A certified plasmid reference material for the standardisation of BCR-ABL1 mRNA quantification by real-time quantitative PCR. Leukemia, 29(2), pp. 369-376. Nature Publishing Group 10.1038/leu.2014.217 , Leukemia, 29 (2, LEUKEMIA, r-IIB SANT PAU. Repositorio Institucional de Producción Científica del Instituto de Investigación Biomédica Sant Pau, instname, White, H, Deprez, L, Corbisier, P, Hall, V, Lin, F, Mazoua, S, Trapmann, S, Aggerholm, A, Andrikovics, H, Akiki, S, Barbany, G, Boeckx, N, Bench, A, Catherwood, M, Cayuela, J-M, Chudleigh, S, Clench, T, Colomer, D, Daraio, F, Dulucq, S, Farrugia, J, Fletcher, L, Foroni, L, Ganderton, R, Gerrard, G, Gineikienė, E, Hayette, S, El Housni, H, Izzo, B, Jansson, M, Johnels, P, Jurcek, T, Kairisto, V, Kizilors, A, Kim, D-W, Lange, T, Lion, T, Polakova, K M, Martinelli, G, McCarron, S, Merle, P A, Milner, B, Mitterbauer-Hohendanner, G, Nagar, M, Nickless, G, Nomdedéu, J, Nymoen, D A, Leibundgut, E O, Ozbek, U, Pajič, T, Pfeifer, H, Preudhomme, C, Raudsepp, K, Romeo, G, Sacha, T, Talmaci, R, Touloumenidou, T, Van der Velden, V H J, Waits, P, Wang, L, Wilkinson, E, Wilson, G, Wren, D, Zadro, R, Ziermann, J, Zoi, K, Müller, M C, Hochhaus, A, Schimmel, H, Cross, N C P & Emons, H 2015, ' A certified plasmid reference material for the standardisation of BCR-ABL1 mRNA quantification by real-time quantitative PCR ', Leukemia, vol. 29, no. 2, pp. 369-76 . https://doi.org/10.1038/leu.2014.217, White, H, Deprez, L, Corbisier, P, Hall, V, Lin, F, Mazoua, S, Trapmann, S, Aggerholm, A, Andrikovics, H, Akiki, S, Barbany, G, Boeckx, N, Bench, A, Catherwood, M, Cayuela, J M, Chudleigh, S, Clench, T, Colomer, D, Daraio, F, Dulucq, S, Farrugia, J, Fletcher, L, Foroni, L, Ganderton, R, Gerrard, G, Gineikiene, E, Hayette, S, El Housni, H, Izzo, B, Jansson, M, Johnels, P, Jurcek, T, Kairisto, V, Kizilors, A, Kim, D W, Lange, T, Lion, T, Polakova, K M, Martinelli, G, McCarron, S, Merle, P A, Milner, B, Mitterbauer-Hohendanner, G, Nagar, M, Nickless, G, Nomdedeu, J, Nymoen, D A, Leibundgut, E O, Ozbek, U, Pajic, T, Pfeifer, H, Preudhomme, C, Raudsepp, K, Romeo, G, Sacha, T, Talmaci, R, Touloumenidou, T, van der Velden, V H J, Waits, P, Wang, L, Wilkinson, E, Wilson, G, Wren, D, Zadro, R, Ziermann, J, Zoi, K, Mueller, M C, Hochhaus, A, Schimmel, H, Cross, N C P & Emons, H 2015, ' A certified plasmid reference material for the standardisation of BCR-ABL1 mRNA quantification by real-time quantitative PCR ', Leukemia, vol. 29, no. 2, pp. 369-376 . https://doi.org/10.1038/leu.2014.217
Publication Year :
2015
Publisher :
Nature Publishing Group, 2015.

Abstract

Serial quantification of BCR-ABL1 mRNA is an important therapeutic indicator in chronic myeloid leukaemia, but there is a substantial variation in results reported by different laboratories. To improve comparability, an internationally accepted plasmid certified reference material (CRM) was developed according to ISO Guide 34:2009. Fragments of BCR-ABL1 (e14a2 mRNA fusion), BCR and GUSB transcripts were amplified and cloned into pUC18 to yield plasmid pIRMM0099. Six different linearised plasmid solutions were produced with the following copy number concentrations, assigned by digital PCR, and expanded uncertainties: 1.08±0.13 × 10 6, 1.08±0.11 × 10 5, 1.03±0.10 × 10 4, 1.02±0.09 × 10 3, 1.04±0.10 × 10 2 and 10.0±1.5 copies/μl. The certification of the material for the number of specific DNA fragments per plasmid, copy number concentration of the plasmid solutions and the assessment of inter-unit heterogeneity and stability were performed according to ISO Guide 35:2006. Two suitability studies performed by 63 BCR-ABL1 testing laboratories demonstrated that this set of 6 plasmid CRMs can help to standardise a number of measured transcripts of e14a2 BCR-ABL1 and three control genes (ABL1, BCR and GUSB). The set of six plasmid CRMs is distributed worldwide by the Institute for Reference Materials and Measurements (Belgium) and its authorised distributors (https://ec.europa.eu/jrc/en/reference-materials/catalogue/; CRM code ERM-AD623a-f).<br />0<br />SCOPUS: ar.j<br />info:eu-repo/semantics/published

Details

Language :
English
ISSN :
08876924
Database :
OpenAIRE
Journal :
Leukemia, 29(2), 369-376. Nature Publishing Group, Leukemia, White, H; Deprez, L; Corbisier, P; Hall, V; Lin, F; Mazoua, S; Trapmann, S; Aggerholm, A; Andrikovics, H; Akiki, S; Barbany, G; Boeckx, N; Bench, A; Catherwood, M; Cayuela, J-M; Chudleigh, S; Clench, T; Colomer, D; Daraio, F; Dulucq, S; ... (2015). A certified plasmid reference material for the standardisation of BCR-ABL1 mRNA quantification by real-time quantitative PCR. Leukemia, 29(2), pp. 369-376. Nature Publishing Group 10.1038/leu.2014.217 <http://dx.doi.org/10.1038/leu.2014.217>, Leukemia, 29 (2, LEUKEMIA, r-IIB SANT PAU. Repositorio Institucional de Producci&#243;n Cient&#237;fica del Instituto de Investigaci&#243;n Biom&#233;dica Sant Pau, instname, White, H, Deprez, L, Corbisier, P, Hall, V, Lin, F, Mazoua, S, Trapmann, S, Aggerholm, A, Andrikovics, H, Akiki, S, Barbany, G, Boeckx, N, Bench, A, Catherwood, M, Cayuela, J-M, Chudleigh, S, Clench, T, Colomer, D, Daraio, F, Dulucq, S, Farrugia, J, Fletcher, L, Foroni, L, Ganderton, R, Gerrard, G, Gineikienė, E, Hayette, S, El Housni, H, Izzo, B, Jansson, M, Johnels, P, Jurcek, T, Kairisto, V, Kizilors, A, Kim, D-W, Lange, T, Lion, T, Polakova, K M, Martinelli, G, McCarron, S, Merle, P A, Milner, B, Mitterbauer-Hohendanner, G, Nagar, M, Nickless, G, Nomded&#233;u, J, Nymoen, D A, Leibundgut, E O, Ozbek, U, Pajič, T, Pfeifer, H, Preudhomme, C, Raudsepp, K, Romeo, G, Sacha, T, Talmaci, R, Touloumenidou, T, Van der Velden, V H J, Waits, P, Wang, L, Wilkinson, E, Wilson, G, Wren, D, Zadro, R, Ziermann, J, Zoi, K, M&#252;ller, M C, Hochhaus, A, Schimmel, H, Cross, N C P &amp; Emons, H 2015, &#39; A certified plasmid reference material for the standardisation of BCR-ABL1 mRNA quantification by real-time quantitative PCR &#39;, Leukemia, vol. 29, no. 2, pp. 369-76 . https://doi.org/10.1038/leu.2014.217, White, H, Deprez, L, Corbisier, P, Hall, V, Lin, F, Mazoua, S, Trapmann, S, Aggerholm, A, Andrikovics, H, Akiki, S, Barbany, G, Boeckx, N, Bench, A, Catherwood, M, Cayuela, J M, Chudleigh, S, Clench, T, Colomer, D, Daraio, F, Dulucq, S, Farrugia, J, Fletcher, L, Foroni, L, Ganderton, R, Gerrard, G, Gineikiene, E, Hayette, S, El Housni, H, Izzo, B, Jansson, M, Johnels, P, Jurcek, T, Kairisto, V, Kizilors, A, Kim, D W, Lange, T, Lion, T, Polakova, K M, Martinelli, G, McCarron, S, Merle, P A, Milner, B, Mitterbauer-Hohendanner, G, Nagar, M, Nickless, G, Nomdedeu, J, Nymoen, D A, Leibundgut, E O, Ozbek, U, Pajic, T, Pfeifer, H, Preudhomme, C, Raudsepp, K, Romeo, G, Sacha, T, Talmaci, R, Touloumenidou, T, van der Velden, V H J, Waits, P, Wang, L, Wilkinson, E, Wilson, G, Wren, D, Zadro, R, Ziermann, J, Zoi, K, Mueller, M C, Hochhaus, A, Schimmel, H, Cross, N C P &amp; Emons, H 2015, &#39; A certified plasmid reference material for the standardisation of BCR-ABL1 mRNA quantification by real-time quantitative PCR &#39;, Leukemia, vol. 29, no. 2, pp. 369-376 . https://doi.org/10.1038/leu.2014.217
Accession number :
edsair.doi.dedup.....91317b239c9428278b210898c146989b