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Complete genome sequence of a novel potyvirus, callistephus mottle virus, identified in Callistephus chinensis
- Source :
- Archives of Virology. 161:3281-3283
- Publication Year :
- 2016
- Publisher :
- Springer Science and Business Media LLC, 2016.
-
Abstract
- The complete genomic sequence of a novel putative member of the genus Potyvirus was detected from Callistephus chinensis (China aster) in South Korea. The genomic RNA consists of 9,859 nucleotides (excluding the 3' poly(A) tail) and contains the typical open reading frame of potyviruses, encoding a putative large polyprotein of 3,154 amino acids. The Callistephus virus is most closely related to plum pox virus and members of the ApVY subgroup which showed 50-52 % polyprotein amino acid sequence identity. These results suggest that the Callistephus virus is a novel member of the genus Potyvirus, tentatively named "callistephus mottle virus" (CalMV).
- Subjects :
- 0106 biological sciences
0301 basic medicine
Callistephus chinensis
viruses
Potyvirus
Genome, Viral
Asteraceae
01 natural sciences
Virus
Open Reading Frames
Viral Proteins
03 medical and health sciences
Virology
Republic of Korea
medicine
Cluster Analysis
Peptide sequence
Phylogeny
Polyproteins
chemistry.chemical_classification
Whole genome sequencing
Genetics
Sequence Homology, Amino Acid
biology
Sequence Analysis, DNA
General Medicine
biology.organism_classification
medicine.disease
Amino acid
Open reading frame
030104 developmental biology
chemistry
RNA, Viral
Mottle
010606 plant biology & botany
Subjects
Details
- ISSN :
- 14328798 and 03048608
- Volume :
- 161
- Database :
- OpenAIRE
- Journal :
- Archives of Virology
- Accession number :
- edsair.doi.dedup.....9154b2fc7e2bdd872c53ad05191394ed
- Full Text :
- https://doi.org/10.1007/s00705-016-3001-x