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Genome-wide association study identifies eight new susceptibility loci for atopic dermatitis in the Japanese population

Authors :
Yusuke Nakamura
Takechiyo Yamada
Tomomitsu Hirota
Tadao Enomoto
Nobuhiro Nakano
Tohru Sakamoto
Chiharu Nishiyama
Masutaka Furue
Emiko Noguchi
Masayuki Amagai
Masafumi Sakashita
Shigaku Ikeda
Ko Okumura
Atsushi Takahashi
Koji Ebe
Hideoki Ogawa
Takashi Sasaki
Nobuyuki Hizawa
Keiko Maeda
Kaori Tomita
Shota Tanaka
Satoru Doi
Tamotsu Ebihara
Hidehisa Saeki
Tatsuhiko Tsunoda
Satoshi Takeuchi
Mayumi Tamari
Akihiko Miyatake
Michiaki Kubo
Shigeharu Fujieda
Source :
Nature genetics. 44(11)
Publication Year :
2012

Abstract

Atopic dermatitis is a common inflammatory skin disease caused by interaction of genetic and environmental factors. On the basis of data from a genome-wide association study (GWAS) and a validation study comprising a total of 3,328 subjects with atopic dermatitis and 14,992 controls in the Japanese population, we report here 8 new susceptibility loci: IL1RL1-IL18R1-IL18RAP (P(combined) = 8.36 × 10(-18)), the major histocompatibility complex (MHC) region (P = 8.38 × 10(-20)), OR10A3-NLRP10 (P = 1.54 × 10(-22)), GLB1 (P = 2.77 × 10(-16)), CCDC80 (P = 1.56 × 10(-19)), CARD11 (P = 7.83 × 10(-9)), ZNF365 (P = 5.85 × 10(-20)) and CYP24A1-PFDN4 (P = 1.65 × 10(-8)). We also replicated the associations of the FLG, C11orf30, TMEM232-SLC25A46, TNFRSF6B-ZGPAT, OVOL1, ACTL9 and KIF3A-IL13 loci that were previously reported in GWAS of European and Chinese individuals and a meta-analysis of GWAS for atopic dermatitis. These findings advance the understanding of the genetic basis of atopic dermatitis.

Details

ISSN :
15461718
Volume :
44
Issue :
11
Database :
OpenAIRE
Journal :
Nature genetics
Accession number :
edsair.doi.dedup.....934d2766e705b946c8f85f6e80f68aa0