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The complete chloroplast genome sequence of an important medicinal plant Cynanchum wilfordii (Maxim.) Hemsl. (Apocynaceae)
- Source :
- Mitochondrial DNA Part A. 27:3747-3748
- Publication Year :
- 2015
- Publisher :
- Informa UK Limited, 2015.
-
Abstract
- Cynanchum wilfordii (Maxim.) Hemsl. is a traditional medicinal herb belonging to the Asclepiadoideae subfamily, whose dried roots have been used as traditional medicine in Asia. The complete chloroplast genome of C. wilfordii was generated by de novo assembly using the small amount of whole genome sequencing data. The chloroplast genome of C. wilfordii was 161 241 bp long, composed of large single copy region (91 995 bp), small single copy region (19 930 bp) and a pair of inverted repeat regions (24 658 bp). The overall GC contents of the chloroplast genome was 37.8%. A total of 114 genes were annotated, which included 80 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that C. wilfordii is most closely related to Asclepias nivea (Caribbean milkweed) and Asclepias syriaca (common milkweed) within the Asclepiadoideae subfamily.
- Subjects :
- 0301 basic medicine
Whole genome sequencing
Base Composition
Plants, Medicinal
Subfamily
Asclepias syriaca
Cynanchum
Whole Genome Sequencing
biology
Inverted repeat
Asclepiadoideae
Asclepias nivea
biology.organism_classification
Medicine, Korean Traditional
Genome
Evolution, Molecular
03 medical and health sciences
030104 developmental biology
Botany
Genetics
Genome, Chloroplast
Molecular Biology
Gene
Phylogeny
Subjects
Details
- ISSN :
- 24701408 and 24701394
- Volume :
- 27
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA Part A
- Accession number :
- edsair.doi.dedup.....93ca8fe51a678493792f67c36cfaa19b
- Full Text :
- https://doi.org/10.3109/19401736.2015.1079887