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The complete chloroplast genome sequence of an important medicinal plant Cynanchum wilfordii (Maxim.) Hemsl. (Apocynaceae)

Authors :
Tae-Jin Yang
Junki Lee
Hyun-Seung Park
Kyu-Yeob Kim
Kyung-Hee Kim
Sang-Choon Lee
Rack Seon Seong
Sang Hyun Sung
Young Hun Shim
Source :
Mitochondrial DNA Part A. 27:3747-3748
Publication Year :
2015
Publisher :
Informa UK Limited, 2015.

Abstract

Cynanchum wilfordii (Maxim.) Hemsl. is a traditional medicinal herb belonging to the Asclepiadoideae subfamily, whose dried roots have been used as traditional medicine in Asia. The complete chloroplast genome of C. wilfordii was generated by de novo assembly using the small amount of whole genome sequencing data. The chloroplast genome of C. wilfordii was 161 241 bp long, composed of large single copy region (91 995 bp), small single copy region (19 930 bp) and a pair of inverted repeat regions (24 658 bp). The overall GC contents of the chloroplast genome was 37.8%. A total of 114 genes were annotated, which included 80 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that C. wilfordii is most closely related to Asclepias nivea (Caribbean milkweed) and Asclepias syriaca (common milkweed) within the Asclepiadoideae subfamily.

Details

ISSN :
24701408 and 24701394
Volume :
27
Database :
OpenAIRE
Journal :
Mitochondrial DNA Part A
Accession number :
edsair.doi.dedup.....93ca8fe51a678493792f67c36cfaa19b
Full Text :
https://doi.org/10.3109/19401736.2015.1079887