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<scp>Wallace</scp> : A flexible platform for reproducible modeling of species niches and distributions built for community expansion
- Source :
- Kass, J M, Vilela, B, Aiello-Lammens, M E, Muscarella, R, Merow, C & Anderson, R P 2018, ' WALLACE : A flexible platform for reproducible modeling of species niches and distributions built for community expansion ', Methods in Ecology and Evolution, vol. 9, no. 4, pp. 1151-1156 . https://doi.org/10.1111/2041-210X.12945
- Publication Year :
- 2018
- Publisher :
- Wiley, 2018.
-
Abstract
- Abtract 1.Scientific research increasingly calls for open-source software that is flexible, interactive, and expandable, while providing methodological guidance and reproducibility. Currently, many analyses in ecology are implemented with “black box” graphical user interfaces that lack flexibility or command-line interfaces that are infrequently used by non-specialists. 2.To help remedy this situation in the context of species distribution modeling, we created Wallace, an open and modular application with a richly documented graphical user interface to underlying R scripts that is flexible and highly interactive. 3.Wallace guides users from acquiring and processing data to building models and examining predictions. Additionally, it is designed to grow via community contributions of new modules to expand functionality. All results are downloadable, along with code to reproduce the analysis. 4.Wallace provides an example of an innovative platform to increase access to cutting-edge methods and encourage plurality in science and collaboration in software development. This article is protected by copyright. All rights reserved.
- Subjects :
- 0106 biological sciences
0301 basic medicine
spatial analysis
Computer science
Context (language use)
ECOLOGY
computer.software_genre
010603 evolutionary biology
01 natural sciences
03 medical and health sciences
Software
reproducibility
biogeography
Ecology, Evolution, Behavior and Systematics
Graphical user interface
Flexibility (engineering)
Black box (phreaking)
COMPLEXITY
software
species distribution model
business.industry
Ecological Modeling
Software development
MAXENT
Modular design
030104 developmental biology
Scripting language
range
Software engineering
business
computer
Subjects
Details
- ISSN :
- 2041210X
- Volume :
- 9
- Database :
- OpenAIRE
- Journal :
- Methods in Ecology and Evolution
- Accession number :
- edsair.doi.dedup.....941ca7f8eafc6215bfbcf88a2ea735a0
- Full Text :
- https://doi.org/10.1111/2041-210x.12945