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An immune-related model based on INHBA, JAG2 and CCL19 to predict the prognoses of colon cancer patients
- Source :
- Cancer Cell International, Vol 21, Iss 1, Pp 1-11 (2021), Cancer Cell International
- Publication Year :
- 2021
- Publisher :
- BMC, 2021.
-
Abstract
- Background Colorectal cancer (CRC) is the leading cause of cancer deaths and most common malignant tumors worldwide. Immune-related genes (IRGs) can predict prognoses of patients and the effects of immunotherapy. A series of colon cancer (CCa) samples from The Cancer Genome Atlas (TCGA) were analyzed to provide a new perspective into this field. Methods Differential IRGs and IRGs with significant clinical outcomes (sIRGs) were calculated by the limma algorithm and univariate COX regression analysis. The potential molecular mechanisms of IRGs were detected by PPI, KEGG and GO analysis. Immune-related risk score model (IRRSM) was established based on multivariate COX regression analysis. Based on the median risk score of IRRSM, the high-risk group and low-risk group were distinguished. The expression levels of IHNBA and JAG2 and relationships between IHNBA and clinical features were verified by RT-qPCR. Results 6 differential sIRGs of patients with CCa were selected by univariate COX regression analysis. Based on the sIRGs (INHBA, JAG2 and CCL19), the IRRSM was established to predict survival probability of CCa patients and to explore the potential correlations with clinical features. Furthermore, IRRSM reflected the infiltration status of 22 types of immune cells. The expression levels of IHNBA and JAG2 were higher in CCa tissues than that in adjacent normal tissues. The expression levels of IHNBA and JAG2 were increased in advanced T stages. Conclusion Our results illustrated that some sIRGs showed the latent value of predicting the prognoses of CCa patients and the clinical features. This study could provide a new insight for immune research and treatment strategies in CCa patients.
- Subjects :
- Oncology
Cancer Research
medicine.medical_specialty
Colorectal cancer
medicine.medical_treatment
03 medical and health sciences
0302 clinical medicine
Internal medicine
Genetics
medicine
Immune-related risk score
KEGG
IRGs
RC254-282
030304 developmental biology
0303 health sciences
Framingham Risk Score
QH573-671
Proportional hazards model
business.industry
Univariate
Cancer
Neoplasms. Tumors. Oncology. Including cancer and carcinogens
Immunotherapy
medicine.disease
Immune-related genes
Prognosis
030220 oncology & carcinogenesis
business
Primary Research
CCa
Cytology
Subjects
Details
- Language :
- English
- ISSN :
- 14752867
- Volume :
- 21
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Cancer Cell International
- Accession number :
- edsair.doi.dedup.....9545177e0f2515cf04e792ba6730fb94