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Unraveling the Tissue-Specific Gene Signatures of Gilthead Sea Bream (Sparus aurata L.) after Hyper- and Hypo-Osmotic Challenges
- Source :
- Digital.CSIC. Repositorio Institucional del CSIC, instname, PLoS ONE, Vol 11, Iss 2, p e0148113 (2016), PLoS ONE
- Publication Year :
- 2016
- Publisher :
- Public Library of Science (PLoS), 2016.
-
Abstract
- A custom microarray was used for the transcriptomic profiling of liver, gills and hypothalamus in response to hypo- (38‰ → 5‰) or hyper- (38‰ → 55‰) osmotic challenges (7 days after salinity transfer) in gilthead sea bream (Sparus aurata) juveniles. The total number of differentially expressed genes was 777. Among them, 341 and 310 were differentially expressed in liver after hypo- and hyper-osmotic challenges, respectively. The magnitude of changes was lower in gills and hypothalamus with around 131 and 160 responsive genes in at least one osmotic stress condition, respectively. Regardless of tissue, a number of genes were equally regulated in either hypo- and hyper-osmotic challenges: 127 out of 524 in liver, 11 out of 131 in gills and 19 out of 160 in hypothalamus. In liver and gills, functional analysis of differentially expressed genes recognized two major clusters of overlapping canonical pathways that were mostly related to “Energy Metabolism” and “Oxidative Stress”. The later cluster was represented in all the analyzed tissues, including the hypothalamus, where differentially expressed genes related to “Cell and tissue architecture” were also over-represented. Overall the response for “Energy Metabolism” was the up-regulation, whereas for oxidative stress-related genes the type of response was highly dependent of tissue. These results support common and different osmoregulatory responses in the three analyzed tissues, helping to load new allostatic conditions or even to return to basal levels after hypo- or hyper-osmotic challenges according to the different physiological role of each tissue.<br />This research was funded by the Spanish Ministry of Economic Affairs and Competitiveness (MINECO) with FEDER/ERDF contribution by projects AGL2013-48835-C2-1-R to JMM and AQUAGENOMICS (CDS2007-00002) to MY and JPS. JAMS is supported by a Post-Doctoral contract (Juan de la Cierva-formación, Reference FJCI-2014-20161) from Spanish Ministry of Economic Affairs and Competitiveness (MINECO).
- Subjects :
- Gills
Male
0301 basic medicine
Gill
Salinity
Microarray
Microarrays
Respiratory System
Gene Expression
lcsh:Medicine
Physical Chemistry
Biochemistry
Transcriptome
0302 clinical medicine
Cell Signaling
Gene expression
Medicine and Health Sciences
Osmotic pressure
Gene Regulatory Networks
Animal Anatomy
lcsh:Science
Oligonucleotide Array Sequence Analysis
Regulation of gene expression
Multidisciplinary
Brain
Signaling Cascades
Cell biology
Chemistry
Bioassays and Physiological Analysis
Liver
Organ Specificity
Physical Sciences
Metabolic Pathways
Anatomy
Research Article
Signal Transduction
medicine.medical_specialty
Osmotic shock
Hypothalamus
Biology
Research and Analysis Methods
Real-Time Polymerase Chain Reaction
Stress Signaling Cascade
03 medical and health sciences
Osmotic Pressure
Internal medicine
Osmotic Shock
Genetics
medicine
Xenobiotic Metabolism
Animals
RNA, Messenger
Gene Expression Profiling
lcsh:R
Biology and Life Sciences
Reproducibility of Results
Cell Biology
Sea Bream
Gene expression profiling
Metabolism
030104 developmental biology
Endocrinology
Chemical Properties
Aquatic Respiratory Anatomy
Gene Expression Regulation
lcsh:Q
Zoology
030217 neurology & neurosurgery
Subjects
Details
- ISSN :
- 19326203
- Volume :
- 11
- Database :
- OpenAIRE
- Journal :
- PLOS ONE
- Accession number :
- edsair.doi.dedup.....95fd95e9eb012735ca46dba85e754b25
- Full Text :
- https://doi.org/10.1371/journal.pone.0148113