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Prognostic implication of glycolysis related gene signature in non-small cell lung cancer

Authors :
Jie Yao
Ting-Ting Liu
Jian-Ping Li
Xiao Liu
Yi-Qing Qu
Xi-Jia Zhou
Rui Li
Chen Huo
Source :
Journal of Cancer
Publication Year :
2020

Abstract

Abnormal glycolysis is one of the hallmarks of cancer and plays an important role in its development. This study was devoted to identify glycolysis related genes as prognostic biomarkers for non-small cell lung cancer (NSCLC). The mRNA expression profile and clinical follow-up data were obtained using The Cancer Genome Atlas (TCGA) database. The validation set was obtained by bootstrap method of random repeated sampling. A total of 200 glycolysis-related genes were obtained from Gene Set Enrichment Analysis (GSEA) and 46 genes were significantly associated with overall survival (OS). Five genes (PKP2, LDHA, HMMR, COL5A1 and B3GNT3) were eventually identified to calculate risk score of NSCLC patients. The univariate and multivariate Cox regression analysis indicated that the risk score was an independent prognostic factor (training set: HR=2.126, 95% CI [1.605, 2.815], p

Details

ISSN :
18379664
Volume :
12
Issue :
3
Database :
OpenAIRE
Journal :
Journal of Cancer
Accession number :
edsair.doi.dedup.....986270e601389571f0d73054a8a6cc76