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Prognostic implication of glycolysis related gene signature in non-small cell lung cancer
- Source :
- Journal of Cancer
- Publication Year :
- 2020
-
Abstract
- Abnormal glycolysis is one of the hallmarks of cancer and plays an important role in its development. This study was devoted to identify glycolysis related genes as prognostic biomarkers for non-small cell lung cancer (NSCLC). The mRNA expression profile and clinical follow-up data were obtained using The Cancer Genome Atlas (TCGA) database. The validation set was obtained by bootstrap method of random repeated sampling. A total of 200 glycolysis-related genes were obtained from Gene Set Enrichment Analysis (GSEA) and 46 genes were significantly associated with overall survival (OS). Five genes (PKP2, LDHA, HMMR, COL5A1 and B3GNT3) were eventually identified to calculate risk score of NSCLC patients. The univariate and multivariate Cox regression analysis indicated that the risk score was an independent prognostic factor (training set: HR=2.126, 95% CI [1.605, 2.815], p
- Subjects :
- 0301 basic medicine
Oncology
Multivariate statistics
medicine.medical_specialty
risk score
03 medical and health sciences
0302 clinical medicine
Internal medicine
medicine
Lung cancer
Gene
non-small cell lung cancer
Framingham Risk Score
Receiver operating characteristic
Proportional hazards model
business.industry
Univariate
glycolysis
TCGA
medicine.disease
030104 developmental biology
The Hallmarks of Cancer
030220 oncology & carcinogenesis
prognosis
business
Research Paper
Subjects
Details
- ISSN :
- 18379664
- Volume :
- 12
- Issue :
- 3
- Database :
- OpenAIRE
- Journal :
- Journal of Cancer
- Accession number :
- edsair.doi.dedup.....986270e601389571f0d73054a8a6cc76