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The complex structure of polyhydroxybutyrate (PHB) granules: four orthologous and paralogous phasins occur in Ralstonia eutropha
- Source :
- Scopus-Elsevier
- Publication Year :
- 2004
- Publisher :
- Microbiology Society, 2004.
-
Abstract
- Analysis of the genome sequence of the polyhydroxyalkanoate- (PHA) accumulating bacteriumRalstonia eutrophastrain H16 revealed three homologues (PhaP2, PhaP3 and PhaP4) of the phasin protein PhaP1. PhaP1 is known to constitute the major component of the layer at the surface of poly(3-hydroxybutyrate), poly(3HB), granules. PhaP2, PhaP3 and PhaP4 exhibited 42, 49 and 45 % identity or 61, 62 and 63 % similarity to PhaP1, respectively. The calculated molecular masses of PhaP1, PhaP2, PhaP3 and PhaP4 were 20·0, 20·2, 19·6 and 20·2 kDa, respectively. RT-PCR analysis showed thatphaP2,phaP3andphaP4were transcribed under conditions permissive for accumulation of poly(3HB). 2D PAGE of the poly(3HB) granule proteome and analysis of the detected proteins by MALDI-TOF clearly demonstrated that PhaP1, PhaP3 and PhaP4 are bound to the poly(3HB) granules in the cells. PhaP3 was expressed at a significantly higher level in PhaP1-negative mutants. Occurrence of an unknown protein with an N-terminal amino-acid sequence identical to that of PhaP2 in crude cellular extracts ofR. eutrophahad previously been shown by others. Although PhaP2 could not be localizedin vivoon poly(3HB) granules,in vitroexperiments clearly demonstrated binding of PhaP2 to these granules. Further analysis of complete or partial genomes of other poly(3HB)-accumulating bacteria revealed the existence of multiple phasin homologues inRalstonia solanacearum,Burkholderia fungorumandAzotobacter vinelandii. These new and unexpected findings should affect our current models of PHA-granule structure and may also have a considerable impact on the establishment of heterologous production systems for PHAs.
- Subjects :
- Proteome
Transcription, Genetic
Sequence analysis
Polyesters
Molecular Sequence Data
Hydroxybutyrates
Microbiology
Polyhydroxybutyrate
03 medical and health sciences
Bacterial Proteins
Ralstonia
Phylogeny
030304 developmental biology
Inclusion Bodies
Ralstonia solanacearum
0303 health sciences
biology
030306 microbiology
Granule (cell biology)
Nucleic acid sequence
Gene Expression Regulation, Bacterial
Sequence Analysis, DNA
biology.organism_classification
DNA-Binding Proteins
Biochemistry
Azotobacter vinelandii
Cupriavidus necator
Burkholderia fungorum
Subjects
Details
- ISSN :
- 14652080 and 13500872
- Volume :
- 150
- Database :
- OpenAIRE
- Journal :
- Microbiology
- Accession number :
- edsair.doi.dedup.....9b6402518eca1bfa5931bd6add2a7ce0
- Full Text :
- https://doi.org/10.1099/00221287-150-9-3089