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Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology

Authors :
Bjornsdottir, Gyda
Stefánsdóttir, Lilja
Thorleifsson, Gudmar
Sulem, Patrick
Norland, Kristjan
Ferkingstad, Egil
Oddsson, Asmundur
Zink, Florian
Lund, Sigrun H.
Nawaz, Muhammad S.
Bragi Walters, G.
Skuladottir, Astros Th.
Gudjonsson, Sigurjon A.
Einarsson, Gudmundur
Halldorsson, Gisli H.
Bjarnadottir, Valgerdur
Sveinbjornsson, Gardar
Helgadottir, Anna
Styrkársdóttir, Unnur
Gudmundsson, Larus J.
Pedersen, Ole B.
Hansen, Thomas Folkmann
Werge, Thomas
Banasik, Karina
Troelsen, Anders
Skou, Soren T.
Thørner, Lise Wegner
Erikstrup, Christian
Nielsen, Kaspar Rene
Mikkelsen, Susan
Andersen, Steffen
Brunak, Søren
Burgdorf, Kristoffer
Hjalgrim, Henrik
Jemec, Gregor
Jennum, Poul
Johansson, Per Ingemar
Nielsen, Kasper Rene
Nyegaard, Mette
Bruun, Mie Topholm
Pedersen, Ole Birger
Dinh, Khoa Manh
Sørensen, Erik
Ostrowski, Sisse R.
Johansson, Pär Ingemar
Gudbjartsson, Daniel F.
Stefansson, Hreinn
Þorsteinsdóttir, Unnur
Larsen, Margit Anita Hørup
Didriksen, Maria
Sækmose, Susanne
Zeggini, Eleftheria
Hatzikotoulas, Konstantinos
Southam, Lorraine
Gilly, Arthur
Barysenka, Andrei
van Meurs, Joyce B. J.
Boer, Cindy G.
Uitterlinden, André G.
Jonsson, Helgi
Ingvarsson, Thorvaldur
Esko, Tõnu
Mägi, Reedik
Teder-Laving, Maris
Ikegawa, Shiro
Terao, Chikashi
Takuwa, Hiroshi
Meulenbelt, Ingrid
Coutinho de Almeida, Rodrigo
Kloppenburg, Margreet
Tuerlings, Margo
Slagboom, P. Eline
Nelissen, Rob R. G. H. H.
Valdes, Ana M.
Mangino, Massimo
Tsezou, Aspasia
Zengini, Eleni
Alexiadis, George
Babis, George C.
Cheah, Kathryn S. E.
Wu, Tian T.
Samartzis, Dino
Cheung, Jason Pui Yin
Sham, Pak Chung
Kraft, Peter
Kang, Jae Hee
Hveem, Kristian
Zwart, John-Anker
Luetge, Almut
Skogholt, Anne Heidi
Johnsen, Marianne B.
Thomas, Laurent F.
Winsvold, Bendik
Gabrielsen, Maiken E.
Lee, Ming Ta Michael
Zhang, Yanfei
Lietman, Steven A.
Shivakumar, Manu
Smith, George Davey
Tobias, Jonathan H.
Hartley, April
Gaunt, Tom R.
Zheng, Jie
Wilkinson, J. Mark
Steinberg, Julia
Morris, Andrew P.
Jonsdottir, Ingileif
Bjornsson, Aron
Olafsson, Ingvar H.
Ulfarsson, Elfar
Blondal, Josep
Vikingsson, Arnor
Brunak, Soren
Ullum, Henrik
Thorsteinsdottir, Unnur
Thorgeirsson, Thorgeir E.
Stefansson, Kari
Consortium, DBDS Genetic
Consortium, GO
Internal Medicine
Source :
Nature Communications, 13(1):634. Nature Publishing Group, Nature Communications, Vol 13, Iss 1, Pp 1-13 (2022), Bjornsdottir, G, Stefansdottir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkarsdottir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E, Stefansson, K, DBDS Genetic Consortium & GO Consortium 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, 634 . https://doi.org/10.1038/s41467-022-28167-1, Bjornsdottir, G, Stefánsdóttir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkársdóttir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, Andersen, S, Brunak, S, Burgdorf, K, Hjalgrim, H, Jemec, G, Jennum, P, Johansson, P I, Nielsen, K R, Nyegaard, M, Bruun, M T, Pedersen, O B, Dinh, K M, Sørensen, E, Ostrowski, S R, Johansson, P I, Gudbjartsson, D F, Stefansson, H, Þorsteinsdóttir, U, Larsen, M A H, Didriksen, M, Sækmose, S, Zeggini, E, Hatzikotoulas, K, Southam, L, Gilly, A, Barysenka, A, van Meurs, J B J, Boer, C G, Uitterlinden, A G, Styrkársdóttir, U, Stefánsdóttir, L, Jonsson, H, Ingvarsson, T, Esko, T, Mägi, R, Teder-Laving, M, Ikegawa, S, Terao, C, Takuwa, H, Meulenbelt, I, Coutinho de Almeida, R, Kloppenburg, M, Tuerlings, M, Slagboom, P E, Nelissen, R R G H H, Valdes, A M, Mangino, M, Tsezou, A, Zengini, E, Alexiadis, G, Babis, G C, Cheah, K S E, Wu, T T, Samartzis, D, Cheung, J P Y, Sham, P C, Kraft, P, Kang, J H, Hveem, K, Zwart, J-A, Luetge, A, Skogholt, A H, Johnsen, M B, Thomas, L F, Winsvold, B, Gabrielsen, M E, Lee, M T M, Zhang, Y, Lietman, S A, Shivakumar, M, Smith, G D, Tobias, J H, Hartley, A, Gaunt, T R, Zheng, J, Wilkinson, J M, Steinberg, J, Morris, A P, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E, Stefansson, K, Consortium, DBDS G & Consortium, GO 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, no. 1, 634 . https://doi.org/10.1038/s41467-022-28167-1, Bjornsdottir, G, Stefansdottir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkarsdottir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, DBDS Genetic Consortium, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E, Stefansson, K & Nyegaard, M 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, no. 1, 634 . https://doi.org/10.1038/s41467-022-28167-1, Bjornsdottir, G, Stefánsdóttir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkársdóttir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, DBDS Genetic Consortium, GO Consortium, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E & Nyegaard, M 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, 634 . https://doi.org/10.1038/s41467-022-28167-1
Publication Year :
2022

Abstract

Back pain is a common and debilitating disorder with largely unknown underlying biology. Here we report a genome-wide association study of back pain using diagnoses assigned in clinical practice; dorsalgia (119,100 cases, 909,847 controls) and intervertebral disc disorder (IDD) (58,854 cases, 922,958 controls). We identify 41 variants at 33 loci. The most significant association (ORIDD = 0.92, P = 1.6 × 10−39; ORdorsalgia = 0.92, P = 7.2 × 10−15) is with a 3’UTR variant (rs1871452-T) in CHST3, encoding a sulfotransferase enzyme expressed in intervertebral discs. The largest effects on IDD are conferred by rare (MAF = 0.07 − 0.32%) loss-of-function (LoF) variants in SLC13A1, encoding a sodium-sulfate co-transporter (LoF burden OR = 1.44, P = 3.1 × 10−11); variants that also associate with reduced serum sulfate. Genes implicated by this study are involved in cartilage and bone biology, as well as neurological and inflammatory processes.

Details

Language :
English
ISSN :
20411723
Database :
OpenAIRE
Journal :
Nature Communications, 13(1):634. Nature Publishing Group, Nature Communications, Vol 13, Iss 1, Pp 1-13 (2022), Bjornsdottir, G, Stefansdottir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkarsdottir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E, Stefansson, K, DBDS Genetic Consortium & GO Consortium 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, 634 . https://doi.org/10.1038/s41467-022-28167-1, Bjornsdottir, G, Stefánsdóttir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkársdóttir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, Andersen, S, Brunak, S, Burgdorf, K, Hjalgrim, H, Jemec, G, Jennum, P, Johansson, P I, Nielsen, K R, Nyegaard, M, Bruun, M T, Pedersen, O B, Dinh, K M, Sørensen, E, Ostrowski, S R, Johansson, P I, Gudbjartsson, D F, Stefansson, H, Þorsteinsdóttir, U, Larsen, M A H, Didriksen, M, Sækmose, S, Zeggini, E, Hatzikotoulas, K, Southam, L, Gilly, A, Barysenka, A, van Meurs, J B J, Boer, C G, Uitterlinden, A G, Styrkársdóttir, U, Stefánsdóttir, L, Jonsson, H, Ingvarsson, T, Esko, T, Mägi, R, Teder-Laving, M, Ikegawa, S, Terao, C, Takuwa, H, Meulenbelt, I, Coutinho de Almeida, R, Kloppenburg, M, Tuerlings, M, Slagboom, P E, Nelissen, R R G H H, Valdes, A M, Mangino, M, Tsezou, A, Zengini, E, Alexiadis, G, Babis, G C, Cheah, K S E, Wu, T T, Samartzis, D, Cheung, J P Y, Sham, P C, Kraft, P, Kang, J H, Hveem, K, Zwart, J-A, Luetge, A, Skogholt, A H, Johnsen, M B, Thomas, L F, Winsvold, B, Gabrielsen, M E, Lee, M T M, Zhang, Y, Lietman, S A, Shivakumar, M, Smith, G D, Tobias, J H, Hartley, A, Gaunt, T R, Zheng, J, Wilkinson, J M, Steinberg, J, Morris, A P, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E, Stefansson, K, Consortium, DBDS G & Consortium, GO 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, no. 1, 634 . https://doi.org/10.1038/s41467-022-28167-1, Bjornsdottir, G, Stefansdottir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkarsdottir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, DBDS Genetic Consortium, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E, Stefansson, K & Nyegaard, M 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, no. 1, 634 . https://doi.org/10.1038/s41467-022-28167-1, Bjornsdottir, G, Stefánsdóttir, L, Thorleifsson, G, Sulem, P, Norland, K, Ferkingstad, E, Oddsson, A, Zink, F, Lund, S H, Nawaz, M S, Bragi Walters, G, Skuladottir, A T, Gudjonsson, S A, Einarsson, G, Halldorsson, G H, Bjarnadottir, V, Sveinbjornsson, G, Helgadottir, A, Styrkársdóttir, U, Gudmundsson, L J, Pedersen, O B, Hansen, T F, Werge, T, Banasik, K, Troelsen, A, Skou, S T, Thørner, L W, Erikstrup, C, Nielsen, K R, Mikkelsen, S, DBDS Genetic Consortium, GO Consortium, Jonsdottir, I, Bjornsson, A, Olafsson, I H, Ulfarsson, E, Blondal, J, Vikingsson, A, Brunak, S, Ostrowski, S R, Ullum, H, Thorsteinsdottir, U, Stefansson, H, Gudbjartsson, D F, Thorgeirsson, T E & Nyegaard, M 2022, ' Rare SLC13A1 variants associate with intervertebral disc disorder highlighting role of sulfate in disc pathology ', Nature Communications, vol. 13, 634 . https://doi.org/10.1038/s41467-022-28167-1
Accession number :
edsair.doi.dedup.....a437f3a611a9b487e04c29f022013bff
Full Text :
https://doi.org/10.1038/s41467-022-28167-1