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Identification of Suitable Endogenous Normalizers for qRT-PCR Analysis of Plasma microRNA Expression in Essential Hypertension

Authors :
Osama A. Badary
Taimour Y. Langaee
Manal El-Hamamsy
Mohamed Hassan M. Solayman
Archanakumari Patel
Lamia El-Wakeel
Julie A. Johnson
Source :
Molecular Biotechnology. 58:179-187
Publication Year :
2016
Publisher :
Springer Science and Business Media LLC, 2016.

Abstract

Circulating microRNAs (miRNAs) are promising biomarkers for many diseases. Quantitative reverse transcription polymerase chain reaction (qRT-PCR) is a gold standard for miRNA expression profiling that requires proper data normalization. Since there is no universal normalizer, it is recommended to evaluate normalizers under every experimental condition. This study describes the identification of suitable endogenous normalizer(s) (ENs) for plasma miRNA expression in essential hypertension. Expression levels of 5 candidate ENs and 2 plasma quality markers were determined by qRT-PCR in plasma samples from 18 hypertensive patients and 10 healthy controls. NormFinder, GeNorm, and DataAssist software programs were used to select the best EN(s). Expression levels of the 5 candidate ENs were also analyzed in urine samples from hypertensive patients and compared to the plasma samples of the hypertensive patients. Among the analyzed candidates, hsa-miR-92a-3p was identified as the best EN, and hsa-miR-21-5p and hsa-miR-16-5p as the next best. Moreover, hsa-miR-92a-3p showed the most consistent expression between plasma and urine. In conclusion, this study showed that hsa-miR-92a-3p, hsa-miR-21-5p, and hsa-miR-16-5p may be used as normalizers for plasma miRNA expression data in essential hypertension studies.

Details

ISSN :
15590305 and 10736085
Volume :
58
Database :
OpenAIRE
Journal :
Molecular Biotechnology
Accession number :
edsair.doi.dedup.....a6d27efb1ba902360afbbb7b9c98eef8
Full Text :
https://doi.org/10.1007/s12033-015-9912-z