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Identification of Suitable Endogenous Normalizers for qRT-PCR Analysis of Plasma microRNA Expression in Essential Hypertension
- Source :
- Molecular Biotechnology. 58:179-187
- Publication Year :
- 2016
- Publisher :
- Springer Science and Business Media LLC, 2016.
-
Abstract
- Circulating microRNAs (miRNAs) are promising biomarkers for many diseases. Quantitative reverse transcription polymerase chain reaction (qRT-PCR) is a gold standard for miRNA expression profiling that requires proper data normalization. Since there is no universal normalizer, it is recommended to evaluate normalizers under every experimental condition. This study describes the identification of suitable endogenous normalizer(s) (ENs) for plasma miRNA expression in essential hypertension. Expression levels of 5 candidate ENs and 2 plasma quality markers were determined by qRT-PCR in plasma samples from 18 hypertensive patients and 10 healthy controls. NormFinder, GeNorm, and DataAssist software programs were used to select the best EN(s). Expression levels of the 5 candidate ENs were also analyzed in urine samples from hypertensive patients and compared to the plasma samples of the hypertensive patients. Among the analyzed candidates, hsa-miR-92a-3p was identified as the best EN, and hsa-miR-21-5p and hsa-miR-16-5p as the next best. Moreover, hsa-miR-92a-3p showed the most consistent expression between plasma and urine. In conclusion, this study showed that hsa-miR-92a-3p, hsa-miR-21-5p, and hsa-miR-16-5p may be used as normalizers for plasma miRNA expression data in essential hypertension studies.
- Subjects :
- Adult
Male
0301 basic medicine
Bioengineering
Endogeny
Biology
Real-Time Polymerase Chain Reaction
Bioinformatics
Essential hypertension
Applied Microbiology and Biotechnology
Biochemistry
Article
Young Adult
03 medical and health sciences
microRNA
medicine
Humans
Genetic Predisposition to Disease
Molecular Biology
Regulation of gene expression
Gene Expression Profiling
Middle Aged
medicine.disease
body regions
Gene expression profiling
Reverse transcription polymerase chain reaction
MicroRNAs
Circulating MicroRNA
030104 developmental biology
Real-time polymerase chain reaction
Gene Expression Regulation
Hypertension
Female
Essential Hypertension
Biotechnology
Subjects
Details
- ISSN :
- 15590305 and 10736085
- Volume :
- 58
- Database :
- OpenAIRE
- Journal :
- Molecular Biotechnology
- Accession number :
- edsair.doi.dedup.....a6d27efb1ba902360afbbb7b9c98eef8
- Full Text :
- https://doi.org/10.1007/s12033-015-9912-z