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Validation and Disease Risk Assessment of Previously Reported Genome-Wide Genetic Variants Associated With Brugada Syndrome

Authors :
Ching-Yu Julius Chen
Chih-Chien Yu
Shih-Fan Sherri Yeh
Juey-Jen Hwang
Qi-You Yu
Ting-Tse Lin
Min-Tsun Liao
Wen-Jone Chen
Tzu-Pin Lu
Dun-Hui Yang
Amrita Chattopadhyay
Jien-Jiun Chen
Ling Ping Lai
Jiunn-Lee Lin
Eric Y. Chuang
Jing-Yuan Chuang
Jyh-Ming Jimmy Juang
Lian-Yu Lin
Li-Ting Ho
Michael J. Ackerman
Hui-Chun Huang
Yen-Bin Liu
Source :
Circulation. Genomic and Precision Medicine
Publication Year :
2020
Publisher :
Ovid Technologies (Wolters Kluwer Health), 2020.

Abstract

Supplemental Digital Content is available in the text.<br />Background: Brugada syndrome (BrS) is an oligogenic arrhythmic disease with increased risk of sudden cardiac arrest. Several BrS or ECG traits-related single-nucleotide polymorphisms (SNPs) were identified through previous genome-wide association studies in white patients. We aimed to validate these SNPs in BrS patients in the Taiwanese population, assessing the cumulative effect of risk alleles and the BrS-polygenic risk score in predicting cardiac events. Methods: We genotyped 190 unrelated BrS patients using the TWB Array, and Taiwan Biobank was used as controls. SNPs not included in the array were imputed by IMPUTE2. Cox proportional hazards model was used to evaluate the associations between each particular SNP, the collective BrS-polygenic risk score, and clinical outcomes. Results: Of the 88 previously reported SNPs, 22 were validated in Taiwanese BrS patients (P

Details

ISSN :
25748300
Volume :
13
Database :
OpenAIRE
Journal :
Circulation: Genomic and Precision Medicine
Accession number :
edsair.doi.dedup.....a771d280a7b401ff184ee02fda93bf75