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Crystallization and preliminary X-ray diffraction analysis ofSalmonella typhimuriumuridine phosphorylase complexed with 5-fluorouracil
- Source :
- Acta Crystallographica Section F Structural Biology and Crystallization Communications. 65:601-603
- Publication Year :
- 2009
- Publisher :
- International Union of Crystallography (IUCr), 2009.
-
Abstract
- Uridine phosphorylase (UPh; EC 2.4.2.3) catalyzes the phosphorolytic cleavage of the N-glycosidic bond of uridine to form ribose 1-phosphate and uracil. This enzyme also activates pyrimidine-containing drugs, including 5-fluorouracil (5-FU). In order to better understand the mechanism of the enzyme-drug interaction, the complex of Salmonella typhimurium UPh with 5-FU was cocrystallized using the hanging-drop vapour-diffusion method at 294 K. X-ray diffraction data were collected to 2.2 A resolution. Analysis of these data revealed that the crystal belonged to space group C2, with unit-cell parameters a = 158.26, b = 93.04, c = 149.87 A, alpha = gamma = 90, beta = 90.65 degrees . The solvent content was 45.85% assuming the presence of six hexameric molecules of the complex in the unit cell.
- Subjects :
- Models, Molecular
Salmonella typhimurium
Antimetabolites, Antineoplastic
Stereochemistry
Statistics as Topic
Biophysics
macromolecular substances
Cleavage (embryo)
Biochemistry
law.invention
chemistry.chemical_compound
X-Ray Diffraction
Structural Biology
law
Ribose
Escherichia coli
Genetics
Binding site
Crystallization
chemistry.chemical_classification
Uridine Phosphorylase
Binding Sites
Data Collection
Temperature
Water
Uracil
Condensed Matter Physics
Uridine
Crystallography
Enzyme
chemistry
Crystallization Communications
Uridine phosphorylase
biological sciences
bacteria
Fluorouracil
Transformation, Bacterial
Plasmids
Protein Binding
Subjects
Details
- ISSN :
- 17443091
- Volume :
- 65
- Database :
- OpenAIRE
- Journal :
- Acta Crystallographica Section F Structural Biology and Crystallization Communications
- Accession number :
- edsair.doi.dedup.....a8e6973fb782c98e3b3882c35432f1e0
- Full Text :
- https://doi.org/10.1107/s1744309109016133