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Discriminatory usefulness of pulsed-field gel electrophoresis and sequence-based typing in Legionella outbreaks

Authors :
Marian Garcia-Nuñez
Nieves Sopena
Miquel Sabrià
Sara Quero
Maria Luisa Pedro-Botet
Noemí Párraga-Niño
Mercè de Simon
Irene Barrabeig
Source :
Future Microbiology. 11:757-765
Publication Year :
2016
Publisher :
Future Medicine Ltd, 2016.

Abstract

Aim: To compare the discriminatory power of pulsed-field gel electrophoresis (PFGE) and sequence-based typing (SBT) in Legionella outbreaks for determining the infection source. Materials & methods: Twenty-five investigations of Legionnaires’ disease were analyzed by PFGE, SBT and Dresden monoclonal antibody. Results: The results suggested that monoclonal antibody could reduce the number of Legionella isolates to be characterized by molecular methods. The epidemiological concordance PFGE–SBT was 100%, while the molecular concordance was 64%. Adjusted Wallace index (AW) showed that PFGE has better discriminatory power than SBT (AWSBT→PFGE = 0.767; AWPFGE→SBT = 1). The discrepancies appeared mostly in sequence type (ST) 1, a worldwide distributed ST for which PFGE discriminated different profiles. Conclusion: SBT discriminatory power was not sufficient verifying the infection source, especially in worldwide distributed STs, which were classified into different PFGE patterns.

Details

ISSN :
17460921 and 17460913
Volume :
11
Database :
OpenAIRE
Journal :
Future Microbiology
Accession number :
edsair.doi.dedup.....aa7393a1196c7e2192977a15e50dd813
Full Text :
https://doi.org/10.2217/fmb-2015-0030