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Discriminatory usefulness of pulsed-field gel electrophoresis and sequence-based typing in Legionella outbreaks
- Source :
- Future Microbiology. 11:757-765
- Publication Year :
- 2016
- Publisher :
- Future Medicine Ltd, 2016.
-
Abstract
- Aim: To compare the discriminatory power of pulsed-field gel electrophoresis (PFGE) and sequence-based typing (SBT) in Legionella outbreaks for determining the infection source. Materials & methods: Twenty-five investigations of Legionnaires’ disease were analyzed by PFGE, SBT and Dresden monoclonal antibody. Results: The results suggested that monoclonal antibody could reduce the number of Legionella isolates to be characterized by molecular methods. The epidemiological concordance PFGE–SBT was 100%, while the molecular concordance was 64%. Adjusted Wallace index (AW) showed that PFGE has better discriminatory power than SBT (AWSBT→PFGE = 0.767; AWPFGE→SBT = 1). The discrepancies appeared mostly in sequence type (ST) 1, a worldwide distributed ST for which PFGE discriminated different profiles. Conclusion: SBT discriminatory power was not sufficient verifying the infection source, especially in worldwide distributed STs, which were classified into different PFGE patterns.
- Subjects :
- 0301 basic medicine
Microbiology (medical)
Legionella
Concordance
030106 microbiology
Biology
Microbiology
Disease Outbreaks
Discriminatory power
03 medical and health sciences
medicine
Pulsed-field gel electrophoresis
Humans
Typing
Gel electrophoresis
Outbreak
Sequence Analysis, DNA
bacterial infections and mycoses
biology.organism_classification
medicine.disease
Bacterial Typing Techniques
Electrophoresis, Gel, Pulsed-Field
Spain
Legionnaires' disease
Legionnaires' Disease
Subjects
Details
- ISSN :
- 17460921 and 17460913
- Volume :
- 11
- Database :
- OpenAIRE
- Journal :
- Future Microbiology
- Accession number :
- edsair.doi.dedup.....aa7393a1196c7e2192977a15e50dd813
- Full Text :
- https://doi.org/10.2217/fmb-2015-0030