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Experimental and Theoretical Investigations of Infrared Multiple Photon Dissociation Spectra of Glutamine Complexes with Zn2+ and Cd2+
- Source :
- PCCP Physical Chemistry Chemical Physics, 19, 12394-12406, The journal of Physical Chemistry. B, 119(35), 11607-11617. American Chemical Society, Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, 119, 35, pp. 11607-11617, PCCP Physical Chemistry Chemical Physics, 19, pp. 12394-12406, Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, 119, 11607-11617, Physical Chemistry Chemical Physics, 19(19), 12394-12406. Royal Society of Chemistry
- Publication Year :
- 2017
-
Abstract
- Complexes of glutamic acid (Glu) cationized with Zn2+ and Cd2+ were examined by infrared multiple photon dissociation (IRMPD) action spectroscopy using light generated from a free electron laser. Complexes of deprotonated Glu with Zn2+, [Zn(Glu-H)ACN](+) (where ACN = acetonitrile, CH3CN), and intact Glu with CdCl+, CdCl+(Glu) were formed. Notably, photodissociation induces Glu fragmentation rather than ACN loss in the Zn2+ complex. In order to identify the structures formed experimentally, the experimentally obtained spectra were compared to those calculated from optimized structures at the B3LYP/6-311+G(d,p) level for [Zn(Glu-H)ACN](+) and B3LYP/def2-TZVP level with an SDD effective core potential on cadmium for the CdCl+(Glu) system. The main binding motif observed for the heavy metal complex is a charge solvated, tridentate [N, COs, CO] structure where the metal binds to the backbone amino group and carbonyl oxygens of the side-chain and backbone carboxylic acid groups. The Zn2+ system similarly prefers a [N, CO-, COs] binding motif, where binding is observed at one oxygen of the backbone carboxylate site along with the backbone amino and side-chain carbonyl groups. In both cases, the theoretically determined lowest-energy conformers explain the experimental [Zn(Glu-H)ACN](+) and CdCl+(Glu) spectra well.
- Subjects :
- Stereochemistry
Cations, Divalent
Carboxylic acid
Glutamine
General Physics and Astronomy
010402 general chemistry
01 natural sciences
Dissociation (chemistry)
chemistry.chemical_compound
Deprotonation
Fragmentation (mass spectrometry)
Materials Chemistry
Computer Simulation
Carboxylate
Infrared multiphoton dissociation
FELIX
Physical and Theoretical Chemistry
Conformational isomerism
chemistry.chemical_classification
Molecular Structure and Dynamics
010405 organic chemistry
Lasers
Spectrum Analysis
Photodissociation
Photochemical Processes
Surfaces, Coatings and Films
0104 chemical sciences
Zinc
chemistry
Models, Chemical
Quantum Theory
Cadmium
Subjects
Details
- ISSN :
- 14639076 and 15206106
- Database :
- OpenAIRE
- Journal :
- PCCP Physical Chemistry Chemical Physics, 19, 12394-12406, The journal of Physical Chemistry. B, 119(35), 11607-11617. American Chemical Society, Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, 119, 35, pp. 11607-11617, PCCP Physical Chemistry Chemical Physics, 19, pp. 12394-12406, Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, 119, 11607-11617, Physical Chemistry Chemical Physics, 19(19), 12394-12406. Royal Society of Chemistry
- Accession number :
- edsair.doi.dedup.....ab6ea8b3416ff3a479ace2e92c8623d7