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FactorY, a bioinformatic resource for genome-wide promoter analysis
- Source :
- Computers in Biology and Medicine. 39:385-387
- Publication Year :
- 2009
- Publisher :
- Elsevier BV, 2009.
-
Abstract
- The interpretation of the complex molecular descriptions generated by high-throughput gene expression technologies is still challenging. The development of new tools to identify common regulatory mechanisms involved in the control of the expression of a set of co-expressed genes, might enhance our capacity to extract functional information from genomic data sets. Here we present FactorY, a website that allows identification of enriched transcription factor binding sites (TFBSs) in the proximal promoter of a cluster of genes, as well as functional interpretation, and intuitive visualization of the results.
- Subjects :
- Transcription, Genetic
Microarrays
Response element
Health Informatics
Genomics
Computational biology
Biology
Bioinformatics
Genome
Transcriptional regulation
Databases, Genetic
Cluster Analysis
Humans
False Positive Reactions
Promoter Regions, Genetic
Gene
Oligonucleotide Array Sequence Analysis
Binding Sites
Sequence analysis
Computational Biology
Promoter
Computer Science Applications
DNA binding site
Gene Expression Regulation
Multigene Family
Programming Languages
Gene ontology
DNA microarray
Functional genomics
Software
Transcription Factors
Subjects
Details
- ISSN :
- 00104825
- Volume :
- 39
- Database :
- OpenAIRE
- Journal :
- Computers in Biology and Medicine
- Accession number :
- edsair.doi.dedup.....acaf7624416f9c2375021f8be0021dcb