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High Throughput Sequencing Analysis of the Immunoglobulin Heavy Chain Gene from Flow-Sorted B Cell Sub-Populations Define the Dynamics of Follicular Lymphoma Clonal Evolution
- Source :
- PLoS ONE, PLoS ONE, Vol 10, Iss 9, p e0134833 (2015)
- Publication Year :
- 2015
-
Abstract
- Understanding the dynamics of evolution of Follicular Lymphoma (FL) clones during disease progression is important for monitoring and targeting this tumor effectively. Genetic profiling of serial FL biopsies and examples of FL transmission following bone marrow transplant suggest that this disease may evolve by divergent evolution from a common ancestor cell. However where this ancestor cell resides and how it evolves is still unclear. The analysis of the pattern of somatic hypermutation of the immunoglobulin gene (Ig) is traditionally used for tracking the physiological clonal evolution of B cells within the germinal center and allows to discriminate those cells that have just entered the germinal center and display features of ancestor cells from those B cells that keep re-circulating across different lymphoid organs. Here we investigated the pattern of somatic hypermutation of the heavy chain of the immunoglobulin gene (IgH-VH) in 4 flow-sorted B cells subpopulations belonging to different stages of differentiation, from sequential lymph node biopsies of cases displaying diverse patterns of evolution, using the GS-FLX Titanium sequencing platform. We observed an unexpectedly high level of clonality, with hundreds of distinct tumor subclones in the different subpopulations from the same sample, the majority detected at a frequency
- Subjects :
- Immunoglobulin gene
Population
Follicular lymphoma
B-Lymphocyte Subsets
Somatic hypermutation
lcsh:Medicine
Biology
Somatic evolution in cancer
Polymorphism, Single Nucleotide
Clonal Evolution
03 medical and health sciences
0302 clinical medicine
medicine
Humans
Cell Lineage
education
lcsh:Science
Lymphoma, Follicular
B cell
030304 developmental biology
Genetics
0303 health sciences
education.field_of_study
Genomic Library
Multidisciplinary
lcsh:R
Germinal center
High-Throughput Nucleotide Sequencing
medicine.disease
Flow Cytometry
medicine.anatomical_structure
Cell Transformation, Neoplastic
030220 oncology & carcinogenesis
Immunoglobulin heavy chain
lcsh:Q
Immunoglobulin Heavy Chains
Genome-Wide Association Study
Research Article
Subjects
Details
- ISSN :
- 19326203
- Volume :
- 10
- Issue :
- 9
- Database :
- OpenAIRE
- Journal :
- PloS one
- Accession number :
- edsair.doi.dedup.....ae12d34e750ea7e8969bdce1fbf6e7d2