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Bioinformatics analysis of the prognosis and biological significance of HMGB1, HMGB2, and HMGB3 in gastric cancer
- Source :
- Journal of Cellular Physiology. 235:3438-3446
- Publication Year :
- 2019
- Publisher :
- Wiley, 2019.
-
Abstract
- High mobility group box (HMGB) consists primarily of HMGB1, HMGB2, and HMGB3 proteins. Although abnormal HMGB expression is associated with various tumors, the relationship with gastric cancer (GC) remains unclear. In this study, HMGB1, HMGB2, and HMGB3 expression was analyzed using the Oncomine and TCGA databases. Correlations between HMGB1, HMGB2, and HMGB3 and clinicopathological factors were analyzed. cBioPortal was used to analyze HMGB1, HMGB2, and HMGB3 genetic alterations and its gene regulation network in GC tissue. HMGB1, HMGB2, and HMGB3 expression was higher in tumor tissues than in normal tissues, especially in GC. High HMGB1, HMGB2, and HMGB3 expression may predict a poor prognosis among patients with GC (hazard ratios [HR] = 1.90; 95% confidence interval [CI]: [1.30-2.78]) and human digestive system neoplasm (HR = 1.85; 95% CI [1.64-2.10]). These findings suggest that HMGB1, HMGB2, and HMGB3 may be useful prognostic indicators for patients with GC.
- Subjects :
- Male
0301 basic medicine
Physiology
Clinical Biochemistry
chemical and pharmacologic phenomena
HMGB1
HMGB2
03 medical and health sciences
0302 clinical medicine
Stomach Neoplasms
Cell Line, Tumor
HMGB3 Protein
HMGB2 Protein
Humans
Medicine
Neoplasm
HMGB1 Protein
Cell Proliferation
Proportional Hazards Models
Regulation of gene expression
biology
business.industry
Hazard ratio
Computational Biology
Cancer
Cell Biology
Prognosis
medicine.disease
Progression-Free Survival
Human digestive system
Confidence interval
Gene Expression Regulation, Neoplastic
030104 developmental biology
030220 oncology & carcinogenesis
biology.protein
Cancer research
Female
business
Subjects
Details
- ISSN :
- 10974652 and 00219541
- Volume :
- 235
- Database :
- OpenAIRE
- Journal :
- Journal of Cellular Physiology
- Accession number :
- edsair.doi.dedup.....af2ad96533b7578691a82e4da5e65f56
- Full Text :
- https://doi.org/10.1002/jcp.29233