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Loss of Dicer in Sertoli cells has a major impact on the testicular proteome of mice

Authors :
Charles E. Vejnar
Marguerite Neerman-Arbez
Charles Pineau
Antoine Rolland
Olivier Schaad
Serge Nef
Marilena D. Papaioannou
Florian Guillou
Alexandre Fort
Mélanie Lagarrigue
Patrick Descombes
Evgeny M. Zdobnov
Florence Aubry
Françoise Kühne
Department of Genetic Medicine and Development [Geneva]
Université de Genève (UNIGE)
Virus, Environnement et Reproduction
Groupe d'Etude de la Reproduction Chez l'Homme et les Mammiferes (GERHM)
Université de Rennes 1 (UR1)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-IFR140-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Rennes 1 (UR1)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-IFR140-Institut National de la Santé et de la Recherche Médicale (INSERM)-Swiss Institute of Bioinformatics (SIB)
Swiss Institute of Bioinformatics-Swiss Institute of Bioinformatics
Swiss Institute of Bioinformatics (SIB)
Swiss Institute of Bioinformatics
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-IFR140-Institut National de la Santé et de la Recherche Médicale (INSERM)-Station commune de Recherches en Ichtyophysiologie, Biodiversité et Environnement (SCRIBE)
Institut National de la Recherche Agronomique (INRA)-IFR140-Institut National de la Recherche Agronomique (INRA)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-IFR140-Institut National de la Santé et de la Recherche Médicale (INSERM)
Genomics Platform
University of Geneva [Switzerland]-National Center of Competence in Research ‘Frontiers in Genetics'
Physiologie de la reproduction et des comportements [Nouzilly] (PRC)
Centre National de la Recherche Scientifique (CNRS)-Université de Tours-Institut Français du Cheval et de l'Equitation [Saumur]-Institut National de la Recherche Agronomique (INRA)
Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Rennes 1 (UR1)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Rennes 1 (UR1)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Swiss Institute of Bioinformatics [Lausanne] (SIB)
Université de Lausanne (UNIL)-Université de Lausanne (UNIL)
Swiss Institute of Bioinformatics [Lausanne] (SIB)
Université de Lausanne (UNIL)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Station commune de Recherches en Ichtyophysiologie, Biodiversité et Environnement (SCRIBE)
Institut National de la Recherche Agronomique (INRA)-Institut National de la Recherche Agronomique (INRA)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)
Institut National de la Recherche Agronomique (INRA)-Institut Français du Cheval et de l'Equitation [Saumur]-Université de Tours (UT)-Centre National de la Recherche Scientifique (CNRS)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Swiss Institute of Bioinformatics [Lausanne] (SIB)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Station commune de Recherches en Ichtyophysiologie, Biodiversité et Environnement (SCRIBE)
Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut National de la Santé et de la Recherche Médicale (INSERM)
Institut National de la Recherche Agronomique (INRA)-Institut Français du Cheval et de l'Equitation [Saumur]-Université de Tours-Centre National de la Recherche Scientifique (CNRS)
Université de Genève = University of Geneva (UNIGE)
Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Swiss Institute of Bioinformatics [Lausanne] (SIB)
Université de Lausanne = University of Lausanne (UNIL)-Université de Lausanne = University of Lausanne (UNIL)
Université de Lausanne = University of Lausanne (UNIL)
Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Station commune de Recherches en Ichtyophysiologie, Biodiversité et Environnement (SCRIBE)
Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)
Université de Genève = University of Geneva (UNIGE)-National Center of Competence in Research ‘Frontiers in Genetics'
Institut National de la Recherche Agronomique (INRA)-Institut Français du Cheval et de l'Equitation [Saumur] (IFCE)-Université de Tours (UT)-Centre National de la Recherche Scientifique (CNRS)
Université de Rennes (UR)-Institut National de la Santé et de la Recherche Médicale (INSERM)
Source :
Molecular and Cellular Proteomics, Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2011, 10 (4), pp.M900587MCP200. ⟨10.1074/mcp.M900587-MCP200⟩, Molecular & cellular proteomics : MCP, Molecular and Cellular Proteomics, 2011, 10 (4), pp.M900587MCP200. ⟨10.1074/mcp.M900587-MCP200⟩, Molecular and Cellular Proteomics, Vol. 10, No 4 (2011) P. M900587MCP200
Publication Year :
2011
Publisher :
HAL CCSD, 2011.

Abstract

International audience; Sertoli cells (SCs) are the central, essential coordinators of spermatogenesis, without which germ cell development cannot occur. We previously showed that Dicer, an RNaseIII endonuclease required for microRNA (miRNA) biogenesis, is absolutely essential for Sertoli cells to mature, survive, and ultimately sustain germ cell development. Here, using isotope-coded protein labeling, a technique for protein relative quantification by mass spectrometry, we investigated the impact of Sertoli cell-Dicer and subsequent miRNA loss on the testicular proteome. We found that, a large proportion of proteins (50 out of 130) are up-regulated by more that 1.3-fold in testes lacking Sertoli cell-Dicer, yet that this protein up-regulation is mild, never exceeding a 2-fold change, and is not preceeded by alterations of the corresponding mRNAs. Of note, the expression levels of six proteins of interest were further validated using the Absolute Quantification (AQUA) peptide technology. Furthermore, through 3'UTR luciferase assays we identified one up-regulated protein, SOD-1, a Cu/Zn superoxide dismutase whose overexpression has been linked to enhanced cell death through apoptosis, as a likely direct target of three Sertoli cell-expressed miRNAs, miR-125a-3p, miR-872 and miR-24. Altogether, our study, which is one of the few in vivo analyses of miRNA effects on protein output, suggests that, at least in our system, miRNAs play a significant role in translation control.

Subjects

Subjects :
Superoxide Dismutase/genetics/metabolism
Enzymologic
Ribonuclease III
Male
Transcription, Genetic
Proteome
Ribonuclease III/deficiency/genetics
Proteome/metabolism
Inbred C57BL
Biochemistry
Transgenic
Analytical Chemistry
Mice
Superoxide Dismutase-1
MESH: Ribonuclease III
Genes, Reporter
Luciferases, Firefly
RNA interference
Tandem Mass Spectrometry
Testis
MESH: Up-Regulation
ddc:576.5
MESH: Animals
Promoter Regions, Genetic
Luciferases
Luciferases, Firefly/biosynthesis/genetics
3' Untranslated Regions
MESH: Superoxide Dismutase
Sequence Deletion
Regulation of gene expression
0303 health sciences
MESH: Testis
MESH: Gene Expression Regulation, Enzymologic
Testis/metabolism/pathology
030302 biochemistry & molecular biology
MESH: 3' Untranslated Regions
MESH: Sequence Deletion
Sertoli cell
Up-Regulation
MESH: Proteome
medicine.anatomical_structure
RNA Interference
Transcription
Germ cell
MESH: Mice, Transgenic
MESH: RNA Interference
Mice, Transgenic
Biology
Gene Expression Regulation, Enzymologic
Promoter Regions
MicroRNAs/genetics/metabolism
03 medical and health sciences
MESH: Gene Expression Profiling
Genetic
MESH: Sertoli Cells
MESH: Mice, Inbred C57BL
microRNA
MESH: Promoter Regions, Genetic
medicine
Animals
[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology
Molecular Biology
Firefly
Reporter
MESH: Mice
030304 developmental biology
Sertoli Cells
MESH: Luciferases, Firefly
Superoxide Dismutase
Research
Gene Expression Profiling
MESH: Transcription, Genetic
MESH: Genes, Reporter
MESH: Tandem Mass Spectrometry
Molecular biology
MESH: Male
Mice, Inbred C57BL
MicroRNAs
Gene Expression Regulation
Genes
biology.protein
Sertoli Cells/metabolism
Spermatogenesis
MESH: MicroRNAs
Dicer

Details

Language :
English
ISSN :
15359476 and 15359484
Database :
OpenAIRE
Journal :
Molecular and Cellular Proteomics, Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2011, 10 (4), pp.M900587MCP200. ⟨10.1074/mcp.M900587-MCP200⟩, Molecular & cellular proteomics : MCP, Molecular and Cellular Proteomics, 2011, 10 (4), pp.M900587MCP200. ⟨10.1074/mcp.M900587-MCP200⟩, Molecular and Cellular Proteomics, Vol. 10, No 4 (2011) P. M900587MCP200
Accession number :
edsair.doi.dedup.....b01615c777d2f2e9f61d829e9f629873
Full Text :
https://doi.org/10.1074/mcp.M900587-MCP200⟩