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Direct comparison of elastic incoherent neutron scattering experiments with molecular dynamics simulations of DMPC phase transitions

Authors :
Paola Brocca
Yuri Gerelli
Marcus Trapp
Bachir Aoun
Bruno Demé
Judith Peters
Francesca Natali
Mark R. Johnson
Michael Marek Koza
Laura Cantù
Eric Pellegrini
Centre de Recherche sur la Matière Divisée (CRMD)
Centre National de la Recherche Scientifique (CNRS)-Université d'Orléans (UO)
Institut Laue-Langevin (ILL)
ILL
ILL Grenoble, F-38042 Grenoble, France
Univ Milan, LITA, Dept Med Biotechnol & Translat Med, I-20090 Milan, Italy
Department of Physics - University of Parma
University of Parma = Università degli studi di Parma [Parme, Italie]
Source :
European Physical Journal E: Soft matter and biological physics, European Physical Journal E: Soft matter and biological physics, EDP Sciences: EPJ, 2016, 39 (4), The European physical journal. E, Soft matter, 39 (2016). doi:10.1140/epje/i2016-16048-y, info:cnr-pdr/source/autori:Aoun, Bachir; Pellegrini, Eric; Trapp, Marcus; Natali, Francesca; Cantu, Laura; Brocca, Paola; Gerelli, Yuri; Deme, Bruno; Koza, Michael Marek; Johnson, Mark; Peters, Judith/titolo:Direct comparison of elastic incoherent neutron scattering experiments with molecular dynamics simulations of DMPC phase transitions/doi:10.1140%2Fepje%2Fi2016-16048-y/rivista:The European physical journal. E, Soft matter (Print)/anno:2016/pagina_da:/pagina_a:/intervallo_pagine:/volume:39
Publication Year :
2016
Publisher :
HAL CCSD, 2016.

Abstract

Neutron scattering techniques have been employed to investigate 1,2-dimyristoyl-sn -glycero-3-phosphocholine (DMPC) membranes in the form of multilamellar vesicles (MLVs) and deposited, stacked multilamellar-bilayers (MLBs), covering transitions from the gel to the liquid phase. Neutron diffraction was used to characterise the samples in terms of transition temperatures, whereas elastic incoherent neutron scattering (EINS) demonstrates that the dynamics on the sub-macromolecular length-scale and pico- to nano-second time-scale are correlated with the structural transitions through a discontinuity in the observed elastic intensities and the derived mean square displacements. Molecular dynamics simulations have been performed in parallel focussing on the length-, time- and temperature-scales of the neutron experiments. They correctly reproduce the structural features of the main gel-liquid phase transition. Particular emphasis is placed on the dynamical amplitudes derived from experiment and simulations. Two methods are used to analyse the experimental data and mean square displacements. They agree within a factor of 2 irrespective of the probed time-scale, i.e. the instrument utilized. Mean square displacements computed from simulations show a comparable level of agreement with the experimental values, albeit, the best match with the two methods varies for the two instruments. Consequently, experiments and simulations together give a consistent picture of the structural and dynamical aspects of the main lipid transition and provide a basis for future, theoretical modelling of dynamics and phase behaviour in membranes. The need for more detailed analytical models is pointed out by the remaining variation of the dynamical amplitudes derived in two different ways from experiments on the one hand and simulations on the other.

Details

Language :
English
ISSN :
12928941 and 1292895X
Database :
OpenAIRE
Journal :
European Physical Journal E: Soft matter and biological physics, European Physical Journal E: Soft matter and biological physics, EDP Sciences: EPJ, 2016, 39 (4), The European physical journal. E, Soft matter, 39 (2016). doi:10.1140/epje/i2016-16048-y, info:cnr-pdr/source/autori:Aoun, Bachir; Pellegrini, Eric; Trapp, Marcus; Natali, Francesca; Cantu, Laura; Brocca, Paola; Gerelli, Yuri; Deme, Bruno; Koza, Michael Marek; Johnson, Mark; Peters, Judith/titolo:Direct comparison of elastic incoherent neutron scattering experiments with molecular dynamics simulations of DMPC phase transitions/doi:10.1140%2Fepje%2Fi2016-16048-y/rivista:The European physical journal. E, Soft matter (Print)/anno:2016/pagina_da:/pagina_a:/intervallo_pagine:/volume:39
Accession number :
edsair.doi.dedup.....b05efecf83b65e39a26c1a92201bc3f6