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The complete chloroplast genome sequence of Habenaria ciliolaris (Orchidaceae)
- Source :
- Mitochondrial DNA. Part B, Resources, article-version (VoR) Version of Record
- Publication Year :
- 2019
- Publisher :
- Informa UK Limited, 2019.
-
Abstract
- Habenaria ciliolaris is a kind of orchid with ornamental value. In this study, we reported the complete chloroplast genome of H. ciliolaris. The complete chloroplast genome is 154,544 bp in length, consists of a pair of inverted repeat (IR, 25,455 bp) regions, a large single-copy region (LSC, 84,032 bp) and a small single-copy region (SSC, 19,602 bp). It contains 179 genes, including 133 protein-coding genes, 38 tRNAs, and 8 rRNAs. A maximum-likelihood phylogenetic analysis demonstrated a close relationship between H. ciliolaris and Habenaria radiata. This work will be valuable for genetic and phylogenetic studies on H. ciliolaris.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Whole genome sequencing
Orchidaceae
Phylogenetic tree
Illumina sequencing
Biology
biology.organism_classification
010603 evolutionary biology
01 natural sciences
Genome
Habenaria
Chloroplast
03 medical and health sciences
030104 developmental biology
Evolutionary biology
Genetics
Chloroplast genome
phylogenetic
Habenaria ciliolaris
Molecular Biology
Mitogenome Announcement
Illumina dye sequencing
Research Article
Subjects
Details
- ISSN :
- 23802359
- Volume :
- 4
- Database :
- OpenAIRE
- Journal :
- Mitochondrial DNA Part B
- Accession number :
- edsair.doi.dedup.....b2352ecba3c8400f2749e47fb4daafea