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How curvature-generating proteins build scaffolds on membrane nanotubes
- Source :
- Proceedings of the National Academy of Sciences of the United States of America, Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences, 2016, 113 (40), pp.11226-11231. ⟨10.1073/pnas.1606943113⟩, Simunovic, M, Evergren, E, Golushko, I, Prévost, C, Renard, H-F, Johannes, L, McMahon, H T, Lorman, V, Voth, G A & Bassereau, P 2016, ' How curvature-generating proteins build scaffolds on membrane nanotubes ', Proceedings of the National Academy of Sciences, vol. 113, no. 40, pp. 11226-11231 . https://doi.org/10.1073/pnas.1606943113, Proceedings of the National academy of sciences of the United States of America, Vol. 113, no. 40, p. 11226-11231 (2016), Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (40), pp.11226-11231. ⟨10.1073/pnas.1606943113⟩
- Publication Year :
- 2016
- Publisher :
- HAL CCSD, 2016.
-
Abstract
- International audience; Bin/Amphiphysin/Rvs (BAR) domain proteins control the curvature of lipid membranes in endocytosis, trafficking, cell motility, the formation of complex subcellular structures, and many other cellular phenomena. They form 3D assemblies that act as molecular scaffolds to reshape the membrane and alter its mechanical properties. It is unknown, however, how a protein scaffold forms and how BAR domains interact in these assemblies at protein densities relevant for a cell. In this work, we use various experimental, theoretical, and simulation approaches to explore how BAR proteins organize to form a scaffold on a membrane nanotube. By combining quantitative microscopy with analytical modeling, we demonstrate that a highly curving BAR protein endophilin nucleates its scaffolds at the ends of a membrane tube, contrary to a weaker curving protein centaurin, which binds evenly along the tube's length. Our work implies that the nature of local protein-membrane interactions can affect the specific localization of proteins on membrane-remodeling sites. Furthermore, we show that amphipathic helices are dispensable in forming protein scaffolds. Finally, we explore a possible molecular structure of a BAR-domain scaffold using coarse-grained molecular dynamics simulations. Together with fluorescence microscopy, the simulations show that proteins need only to cover 30-40% of a tube's surface to form a rigid assembly. Our work provides mechanical and structural insights into the way BAR proteins may sculpt the membrane as a high-order cooperative assembly in important biological processes.
- Subjects :
- 0301 basic medicine
Scaffold
Materials science
Surface Properties
Bar (music)
[PHYS.PHYS.PHYS-BIO-PH]Physics [physics]/Physics [physics]/Biological Physics [physics.bio-ph]
Nanotechnology
Molecular Dynamics Simulation
Endocytosis
Fluorescence
Protein Structure, Secondary
03 medical and health sciences
Molecular dynamics
0302 clinical medicine
Protein Domains
Fluorescence microscope
Computer Simulation
Adaptor Proteins, Signal Transducing
Binding Sites
Nanotubes
Multidisciplinary
X-Rays
Cell Membrane
Membrane Proteins
Membrane nanotube
Biological Sciences
Lipids
030104 developmental biology
Membrane
Structural Homology, Protein
Calibration
Amphiphysin
Biophysics
030217 neurology & neurosurgery
Subjects
Details
- Language :
- English
- ISSN :
- 00278424 and 10916490
- Database :
- OpenAIRE
- Journal :
- Proceedings of the National Academy of Sciences of the United States of America, Proceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences, 2016, 113 (40), pp.11226-11231. ⟨10.1073/pnas.1606943113⟩, Simunovic, M, Evergren, E, Golushko, I, Prévost, C, Renard, H-F, Johannes, L, McMahon, H T, Lorman, V, Voth, G A & Bassereau, P 2016, ' How curvature-generating proteins build scaffolds on membrane nanotubes ', Proceedings of the National Academy of Sciences, vol. 113, no. 40, pp. 11226-11231 . https://doi.org/10.1073/pnas.1606943113, Proceedings of the National academy of sciences of the United States of America, Vol. 113, no. 40, p. 11226-11231 (2016), Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (40), pp.11226-11231. ⟨10.1073/pnas.1606943113⟩
- Accession number :
- edsair.doi.dedup.....b4767cf22603dd65265cf735028ac79f
- Full Text :
- https://doi.org/10.1073/pnas.1606943113⟩