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Genome-wide analysis of DNA methylation in bronchial washings
- Source :
- Clinical Epigenetics, Vol 10, Iss 1, Pp 1-9 (2018), Clinical Epigenetics
- Publication Year :
- 2018
- Publisher :
- BMC, 2018.
-
Abstract
- Background The objective of this study was to discover DNA methylation biomarkers for detecting non-small lung cancer (NSCLC) in bronchial washings and understanding the association between DNA methylation and smoking cessation. Methods DNA methylation was analyzed in bronchial washing samples from 70 NSCLCs and 53 hospital-based controls using Illumina HumanMethylation450K BeadChip. Methylation levels in these bronchial washings were compared to those in 897 primary lung tissues of The Cancer Genome Atlas (TCGA) data. Results Twenty-four CpGs (p
- Subjects :
- 0301 basic medicine
Oncology
Male
Lung Neoplasms
lcsh:Medicine
Epigenesis, Genetic
Epigenome
0302 clinical medicine
Carcinoma, Non-Small-Cell Lung
Bronchial washing
Hypermethylation
Promoter Regions, Genetic
Genetics (clinical)
Smoking
Area under the curve
Methylation
CpG site
030220 oncology & carcinogenesis
DNA methylation
Female
Lung cancer
Bronchoalveolar Lavage Fluid
medicine.medical_specialty
lcsh:QH426-470
PDGFRA
Sensitivity and Specificity
03 medical and health sciences
Internal medicine
Genetics
Carcinoma
medicine
Humans
Molecular Biology
business.industry
Research
lcsh:R
Case-control study
DNA Methylation
medicine.disease
respiratory tract diseases
lcsh:Genetics
030104 developmental biology
Logistic Models
Case-Control Studies
CpG Islands
Smoking Cessation
business
Developmental Biology
Genome-Wide Association Study
Subjects
Details
- Language :
- English
- ISSN :
- 18687083 and 18687075
- Volume :
- 10
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Clinical Epigenetics
- Accession number :
- edsair.doi.dedup.....bc81b6a752972478331c36f1c640d39b
- Full Text :
- https://doi.org/10.1186/s13148-018-0498-8