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Genome-wide analysis of DNA methylation in bronchial washings

Authors :
Sang-Won Um
Joungho Han
Hong Kwan Kim
Hojoong Kim
Yu Jin Kim
Duk-Hwan Kim
Dongho Kim
Bo Bin Lee
Kyungjong Lee
Young Mog Shim
Source :
Clinical Epigenetics, Vol 10, Iss 1, Pp 1-9 (2018), Clinical Epigenetics
Publication Year :
2018
Publisher :
BMC, 2018.

Abstract

Background The objective of this study was to discover DNA methylation biomarkers for detecting non-small lung cancer (NSCLC) in bronchial washings and understanding the association between DNA methylation and smoking cessation. Methods DNA methylation was analyzed in bronchial washing samples from 70 NSCLCs and 53 hospital-based controls using Illumina HumanMethylation450K BeadChip. Methylation levels in these bronchial washings were compared to those in 897 primary lung tissues of The Cancer Genome Atlas (TCGA) data. Results Twenty-four CpGs (p

Details

Language :
English
ISSN :
18687083 and 18687075
Volume :
10
Issue :
1
Database :
OpenAIRE
Journal :
Clinical Epigenetics
Accession number :
edsair.doi.dedup.....bc81b6a752972478331c36f1c640d39b
Full Text :
https://doi.org/10.1186/s13148-018-0498-8