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CSDB_GT: a new curated database on glycosyltransferases
- Source :
- Glycobiology. 27(4)
- Publication Year :
- 2016
-
Abstract
- Glycosyltransferases (GTs) are carbohydrate-active enzymes (CAZy) involved in the synthesis of natural glycan structures. The application of CAZy is highly demanded in biotechnology and pharmaceutics. However, it is being hindered by the lack of high-quality and comprehensive repositories of the research data accumulated so far. In this paper, we describe a new curated Carbohydrate Structure Glycosyltransferase Database (CSDB_GT). Currently, CSDB_GT provides ca. 780 activities exhibited by GTs, as well as several other CAZy, found in Arabidopsis thaliana and described in ca. 180 publications. It covers most published data on A. thaliana GTs with evidenced functions. CSDB_GT is linked to the Carbohydrate Structure Database (CSDB), which stores data on archaeal, bacterial, fungal and plant glycans. The CSDB_GT data are supported by experimental evidences and can be traced to original publications. CSDB_GT is freely available at http://csdb.glycoscience.ru/gt.html.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Glycan
CAZy
biology
Database
biology.organism_classification
computer.software_genre
01 natural sciences
Biochemistry
03 medical and health sciences
030104 developmental biology
Glycosyltransferase
biology.protein
Arabidopsis thaliana
Carbohydrate composition
computer
010606 plant biology & botany
Research data
Subjects
Details
- ISSN :
- 14602423
- Volume :
- 27
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- Glycobiology
- Accession number :
- edsair.doi.dedup.....bedc2d654b85dbc477c804fc1a98331d