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Telomerecat: A ploidy-agnostic method for estimating telomere length from whole genome sequencing data

Authors :
Farmery, James H. R.
Smith, Mike L.
Huissoon, Aarnoud
Furnell, Abigail
Mead, Adam
Levine, Adam P.
Manzur, Adnan
Thrasher, Adrian
Greenhalgh, Alan
Parker, Alasdair
Sanchis-Juan, Alba
Richter, Alex
Gardham, Alice
Lawrie, Allan
Sohal, Aman
Creaser-Myers, Amanda
Frary, Amy
Greinacher, Andreas
Themistocleous, Andreas
Peacock, Andrew J.
Marshall, Andrew
Mumford, Andrew
Rice, Andrew
Webster, Andrew
Brady, Angie
Koziell, Ania
Manson, Ania
Chandra, Anita
Hensiek, Anke
Veld, Anna Huis In'T.
Maw, Anna
Kelly, Anne M.
Moore, Anthony
Vonk Noordegraaf, Anton
Attwood, Antony
Herwadkar, Archana
Ghofrani, Ardi
Houweling, Arjan C.
Girerd, Barbara
Furie, Bruce
Treacy, Carmen M.
Millar, Carolyn M.
Sewell, Carrock
Roughley, Catherine
Titterton, Catherine
Williamson, Catherine
Hadinnapola, Charaka
Deshpande, Charu
Toh, Cheng-Hock
Bacchelli, Chiara
Patch, Chris
Geet, Chris Van
Babbs, Christian
Bryson, Christine
Penkett, Christopher J.
Rhodes, Christopher J.
Watt, Christopher
Bethune, Claire
Booth, Claire
Lentaigne, Claire
McJannet, Coleen
Church, Colin
French, Courtney
Samarghitean, Crina
Halmagyi, Csaba
Gale, Daniel
Greene, Daniel
Hart, Daniel
Allsup, David
Bennett, David
Edgar, David
Kiely, David G.
Gosal, David
Perry, David J.
Keeling, David
Montani, David
Shipley, Debbie
Whitehorn, Deborah
Fletcher, Debra
Krishnakumar, Deepa
Grozeva, Detelina
Kumararatne, Dinakantha
Thompson, Dorothy
Josifova, Dragana
Maher, Eamonn
Wong, Edwin K. S.
Murphy, Elaine
Dewhurst, Eleanor
Louka, Eleni
Rosser, Elisabeth
Chalmers, Elizabeth
Colby, Elizabeth
Drewe, Elizabeth
McDermott, Elizabeth
Thomas, Ellen
Staples, Emily
Clement, Emma
Matthews, Emma
Wakeling, Emma
Oksenhendler, Eric
Turro, Ernest
Reid, Evan
Wassmer, Evangeline
Raymond, F. Lucy
Hu, Fengyuan
Kennedy, Fiona
Soubrier, Florent
Flinter, Frances
Kovacs, Gabor
Polwarth, Gary
Ambegaonkar, Gautum
Arno, Gavin
Hudson, Gavin
Woods, Geoff
Coghlan, Gerry
Hayman, Grant
Arumugakani, Gururaj
Schotte, Gwen
Cook, H. Terry
Alachkar, Hana
Lango Allen, Hana
Lango-Allen, Hana
Stark, Hannah
Stauss, Hans
Schulze, Harald
Boggard, Harm J.
Baxendale, Helen
Dolling, Helen
Firth, Helen
Gall, Henning
Watson, Henry
Longhurst, Hilary
Markus, Hugh S.
Watkins, Hugh
Simeoni, Ilenia
Emmerson, Ingrid
Roberts, Irene
Quinti, Isabella
Wanjiku, Ivy
Gibbs, J. Simon R.
Thaventhiran, James
Whitworth, James
Hurst, Jane
Collins, Janine
Suntharalingam, Jay
Payne, Jeanette
Thachil, Jecko
Martin, Jennifer M.
Carmichael, Jenny
Maimaris, Jesmeen
Paterson, Joan
Pepke-Zaba, Joanna
Heemskerk, Johan W. M.
Gebhart, Johanna
Davis, John
Pasi, John
Bradley, John R.
Wharton, John
Stephens, Jonathan
Rankin, Julia
Anderson, Julie
Vogt, Julie
von Ziegenweldt, Julie
Rehnstrom, Karola
Megy, Karyn
Talks, Kate
Peerlinck, Kathelijne
Yates, Katherine
Freson, Kathleen
Stirrups, Kathleen
Gomez, Keith
Smith, Kenneth G. C.
Rue-Albrecht, Kevin
Gilmour, Kimberley
Masati, Larahmie
Scelsi, Laura
Southgate, Laura
Ranganathan, Lavanya
Ginsberg, Lionel
Devlin, Lisa
Willcocks, Lisa
Ormondroyd, Liz
Lorenzo, Lorena
Harper, Lorraine
Allen, Louise
Daugherty, Louise
Chitre, Manali
Kurian, Manju
Humbert, Marc
Tischkowitz, Marc
Bitner-Glindzicz, Maria
Erwood, Marie
Scully, Marie
Veltman, Marijke
Caulfield, Mark
Layton, Mark
McCarthy, Mark
Ponsford, Mark
Toshner, Mark
Bleda, Marta
Wilkins, Martin
Mathias, Mary
Reilly, Mary
Afzal, Maryam
Brown, Matthew
Rondina, Matthew
Stubbs, Matthew
Haimel, Matthias
Lees, Melissa
Laffan, Michael A.
Browning, Michael
Gattens, Michael
Richards, Michael
Michaelides, Michel
Lambert, Michele P.
Makris, Mike
de Vries, Minka
Mahdi-Rogers, Mohamed
Saleem, Moin
Thomas, Moira
Holder, Muriel
Eyries, M. lanie
Clements-Brod, Naomi
Canham, Natalie
Dormand, Natalie
Zuydam, Natalie Van
Kingston, Nathalie
Ghali, Neeti
Cooper, Nichola
Morrell, Nicholas W.
Yeatman, Nigel
Roy, Noémi
Shamardina, Olga
Alavijeh, Omid S.
Gresele, Paolo
Nurden, Paquita
Chinnery, Patrick
Deegan, Patrick
Yong, Patrick
Man, Patrick Yu Wai
Corris, Paul A.
Calleja, Paul
Gissen, Paul
Bolton-Maggs, Paula
Rayner-Matthews, Paula
Ghataorhe, Pavandeep K.
Gordins, Pavel
Stein, Penelope
Collins, Peter
Dixon, Peter
Kelleher, Peter
Ancliff, Phil
Yu, Ping
Tait, R. Campbell
Linger, Rachel
Doffinger, Rainer
Machado, Rajiv
Kazmi, Rashid
Sargur, Ravishankar
Favier, Remi
Tan, Rhea
Liesner, Ri
Antrobus, Richard
Sandford, Richard
Scott, Richard
Trembath, Richard
Horvath, Rita
Hadden, Rob
Mackenzieross, Rob V.
Henderson, Robert
MacLaren, Robert
James, Roger
Ghurye, Rohit
Dacosta, Rosa
Hague, Rosie
Mapeta, Rutendo
Armstrong, Ruth
Noorani, Sadia
Murng, Sai
Santra, Saikat
Tuna, Salih
Johnson, Sally
Chong, Sam
Lear, Sara
Walker, Sara
Goddard, Sarah
Mangles, Sarah
Westbury, Sarah
Mehta, Sarju
Hackett, Scott
Nejentsev, Sergey
Moledina, Shahin
Bibi, Shahnaz
Meehan, Sharon
Othman, Shokri
Revel-Vilk, Shoshana
Holden, Simon
McGowan, Simon
Staines, Simon
Savic, Sinisa
Burns, Siobhan
Grigoriadou, Sofia
Papadia, Sofia
Ashford, Sofie
Schulman, Sol
Ali, Sonia
Park, Soo-Mi
Davies, Sophie
Stock, Sophie
Ali, Souad
Deevi, Sri V. V.
Gräf, Stefan
Ghio, Stefano
Wort, Stephen J.
Jolles, Stephen
Austin, Steve
Welch, Steve
Meacham, Stuart
Rankin, Stuart
Walker, Suellen
Seneviratne, Suranjith
Holder, Susan
Sivapalaratnam, Suthesh
Richardson, Sylvia
Kuijpers, Taco
Kuijpers, Taco W.
Bariana, Tadbir K.
Bakchoul, Tamam
Everington, Tamara
Renton, Tara
Young, Tim
Aitman, Timothy
Warner, Timothy Q.
Vale, Tom
Hammerton, Tracey
Pollock, Val
Matser, Vera
Cookson, Victoria
Clowes, Virginia
Qasim, Waseem
Wei, Wei
Erber, Wendy N.
Ouwehand, Willem H.
Astle, William
Egner, William
Turek, Wojciech
Henskens, Yvonne
Tan, Yvonne
Lynch, Andy G.
Other departments
ARD - Amsterdam Reproduction and Development
Paediatric Infectious Diseases / Rheumatology / Immunology
Peerlinck, Kathelijne
Freson, Kathleen
University of St Andrews. Statistics
University of St Andrews. School of Medicine
University of St Andrews. Population and Behavioural Science Division
University of St Andrews. Cellular Medicine Division
Rue-Albrecht, K
VU University medical center
ACS - Pulmonary hypertension & thrombosis
Pulmonary medicine
APH - Quality of Care
Amsterdam Reproduction & Development (AR&D)
Human genetics
ACS - Atherosclerosis & ischemic syndromes
Molecular cell biology and Immunology
Pediatric surgery
APH - Aging & Later Life
Lynch, Andy G [0000-0002-7876-7338]
Apollo - University of Cambridge Repository
Source :
Scientific reports, 8(1). Nature Publishing Group, Scientific Reports, Scientific Reports, 8(1):1300. Nature Publishing Group, Farmery, J H R, Smith, M L, Huissoon, A, Furnell, A, Mead, A, Levine, A P, Manzur, A, Thrasher, A, Greenhalgh, A, Parker, A, Sanchis-Juan, A, Richter, A, Gardham, A, Lawrie, A, Sohal, A, Creaser-Myers, A, Frary, A, Greinacher, A, Themistocleous, A, Peacock, A J, Marshall, A, Mumford, A, Rice, A, Webster, A, Brady, A, Koziell, A, Manson, A, Chandra, A, Hensiek, A, Veld, A H IT, Maw, A, Kelly, A M, Moore, A, Vonk Noordegraaf, A, Attwood, A, Herwadkar, A, Ghofrani, A, Houweling, A C, Girerd, B, Furie, B, Treacy, C M, Millar, C M, Sewell, C, Roughley, C, Titterton, C, Williamson, C, Hadinnapola, C, Deshpande, C, Toh, C-H, Bacchelli, C, Patch, C, Geet, C V, Babbs, C, Bryson, C, Penkett, C J, Rhodes, C J, Watt, C, Bethune, C, Booth, C, Lentaigne, C, McJannet, C, Church, C, French, C, Samarghitean, C, Halmagyi, C, Gale, D, Greene, D, Hart, D, Allsup, D, Bennett, D, Edgar, D, Kiely, D G, Gosal, D, Perry, D J, Keeling, D, Montani, D, Shipley, D, Whitehorn, D, Fletcher, D, Krishnakumar, D, Grozeva, D, Kumararatne, D, Thompson, D, Josifova, D, Maher, E, Wong, E K S, Murphy, E, Dewhurst, E, Louka, E, Rosser, E, Chalmers, E, Colby, E, Drewe, E, McDermott, E, Thomas, E, Staples, E, Clement, E, Matthews, E, Wakeling, E, Oksenhendler, E, Turro, E, Reid, E, Wassmer, E, Raymond, F L, Hu, F, Kennedy, F, Soubrier, F, Flinter, F, Kovacs, G, Polwarth, G, Ambegaonkar, G, Arno, G, Hudson, G, Woods, G, Coghlan, G, Hayman, G, Arumugakani, G, Schotte, G, Cook, H T, Alachkar, H, Lango Allen, H, Lango-Allen, H, Stark, H, Stauss, H, Schulze, H, Boggard, H J, Baxendale, H, Dolling, H, Firth, H, Gall, H, Watson, H, Longhurst, H, Markus, H S, Watkins, H, Simeoni, I, Emmerson, I, Roberts, I, Quinti, I, Wanjiku, I, Gibbs, J S R, Thaventhiran, J, Whitworth, J, Hurst, J, Collins, J, Suntharalingam, J, Payne, J, Thachil, J, Martin, J M, Carmichael, J, Maimaris, J, Paterson, J, Pepke-Zaba, J, Heemskerk, J W M, Gebhart, J, Davis, J, Pasi, J, Bradley, J R, Wharton, J, Stephens, J, Rankin, J, Anderson, J, Vogt, J, von Ziegenweldt, J, Rehnstrom, K, Megy, K, Talks, K, Peerlinck, K, Yates, K, Freson, K, Stirrups, K, Gomez, K, Smith, K G C, Rue-Albrecht, K, Gilmour, K, Masati, L, Scelsi, L, Southgate, L, Ranganathan, L, Ginsberg, L, Devlin, L, Willcocks, L, Ormondroyd, L, Lorenzo, L, Harper, L, Allen, L, Daugherty, L, Chitre, M, Kurian, M, Humbert, M, Tischkowitz, M, Bitner-Glindzicz, M, Erwood, M, Scully, M, Veltman, M, Caulfield, M, Layton, M, McCarthy, M, Ponsford, M, Toshner, M, Bleda, M, Wilkins, M, Mathias, M, Reilly, M, Afzal, M, Brown, M, Rondina, M, Stubbs, M, Haimel, M, Lees, M, Laffan, M A, Browning, M, Gattens, M, Richards, M, Michaelides, M, Lambert, M P, Makris, M, de Vries, M, Mahdi-Rogers, M, Saleem, M, Thomas, M, Holder, M, Eyries, M L, Clements-Brod, N, Canham, N, Dormand, N, Zuydam, N V, Kingston, N, Ghali, N, Cooper, N, Morrell, N W, Yeatman, N, Roy, N, Shamardina, O, Alavijeh, O S, Gresele, P, Nurden, P, Chinnery, P, Deegan, P, Yong, P, Man, P Y W, Corris, P A, Calleja, P, Gissen, P, Bolton-Maggs, P, Rayner-Matthews, P, Ghataorhe, P K, Gordins, P, Stein, P, Collins, P, Dixon, P, Kelleher, P, Ancliff, P, Yu, P, Tait, R C, Linger, R, Doffinger, R, Machado, R, Kazmi, R, Sargur, R, Favier, R, Tan, R, Liesner, R, Antrobus, R, Sandford, R, Scott, R, Trembath, R, Horvath, R, Hadden, R, Mackenzieross, R V, Henderson, R, MacLaren, R, James, R, Ghurye, R, Dacosta, R, Hague, R, Mapeta, R, Armstrong, R, Noorani, S, Murng, S, Santra, S, Tuna, S, Johnson, S, Chong, S, Lear, S, Walker, S, Goddard, S, Mangles, S, Westbury, S, Mehta, S, Hackett, S, Nejentsev, S, Moledina, S, Bibi, S, Meehan, S, Othman, S, Revel-Vilk, S, Holden, S, McGowan, S, Staines, S, Savic, S, Burns, S, Grigoriadou, S, Papadia, S, Ashford, S, Schulman, S, Ali, S, Park, S-M, Davies, S, Stock, S, Ali, S, Deevi, S V V, Gräf, S, Ghio, S, Wort, S J, Jolles, S, Austin, S, Welch, S, Meacham, S, Rankin, S, Walker, S, Seneviratne, S, Holder, S, Sivapalaratnam, S, Richardson, S, Kuijpers, T, Kuijpers, T W, Bariana, T K, Bakchoul, T, Everington, T, Renton, T, Young, T, Aitman, T, Warner, T Q, Vale, T, Hammerton, T, Pollock, V, Matser, V, Cookson, V, Clowes, V, Qasim, W, Wei, W, Erber, W N, Ouwehand, W H, Astle, W, Egner, W, Turek, W, Henskens, Y, Tan, Y & Lynch, A G 2018, ' Telomerecat: A ploidy-agnostic method for estimating telomere length from whole genome sequencing data ', Scientific Reports, vol. 8, no. 1, 1300 . https://doi.org/10.1038/s41598-017-14403-y, Farmery, J H R, Smith, M L, Huissoon, A, Furnell, A, Mead, A, Levine, A P, Manzur, A, Thrasher, A, Greenhalgh, A, Parker, A, Sanchis-Juan, A, Richter, A, Gardham, A, Lawrie, A, Sohal, A, Creaser-Myers, A, Frary, A, Greinacher, A, Themistocleous, A, Peacock, A J, Marshall, A, Mumford, A, Rice, A, Webster, A, Brady, A, Koziell, A, Manson, A, Chandra, A, Hensiek, A, Veld, A H I T, Maw, A, Kelly, A M, Moore, A, Vonk Noordegraaf, A, Attwood, A, Herwadkar, A, Ghofrani, A, Houweling, A C, Girerd, B, Furie, B, Treacy, C M, Millar, C M, Sewell, C, Roughley, C, Titterton, C, Williamson, C, Hadinnapola, C, Deshpande, C, Toh, C H, Bacchelli, C, Patch, C, Geet, C V, Babbs, C, Bryson, C, Penkett, C J, Rhodes, C J, Watt, C, Bethune, C, Booth, C, Lentaigne, C, McJannet, C, Church, C, French, C, Samarghitean, C, Halmagyi, C, Gale, D, Greene, D, Hart, D, Allsup, D, Bennett, D, Edgar, D, Kiely, D G, Gosal, D, Perry, D J, Keeling, D, Montani, D, Shipley, D, Whitehorn, D, Fletcher, D, Krishnakumar, D, Grozeva, D, Kumararatne, D, Thompson, D, Josifova, D, Maher, E, Wong, E K S, Murphy, E, Dewhurst, E, Louka, E, Rosser, E, Chalmers, E, Colby, E, Drewe, E, McDermott, E, Thomas, E, Staples, E, Clement, E, Matthews, E, Wakeling, E, Oksenhendler, E, Turro, E, Reid, E, Wassmer, E, Raymond, F L, Hu, F, Kennedy, F, Soubrier, F, Flinter, F, Kovacs, G, Polwarth, G, Ambegaonkar, G, Arno, G, Hudson, G, Woods, G, Coghlan, G, Hayman, G, Arumugakani, G, Schotte, G, Cook, H T, Alachkar, H, Lango-Allen, H, Lango-Allen, H, Stark, H, Stauss, H, Schulze, H, Boggard, H J, Baxendale, H, Dolling, H, Firth, H, Gall, H, Watson, H, Longhurst, H, Markus, H S, Watkins, H, Simeoni, I, Emmerson, I, Roberts, I, Quinti, I, Wanjiku, I, Gibbs, J S R, Thaventhiran, J, Whitworth, J, Hurst, J, Collins, J, Suntharalingam, J, Payne, J, Thachil, J, Martin, J M, Carmichael, J, Maimaris, J, Paterson, J, Pepke-Zaba, J, Heemskerk, J W M, Gebhart, J, Davis, J, Pasi, J, Bradley, J R, Wharton, J, Stephens, J, Rankin, J, Anderson, J, Vogt, J, Von Ziegenweldt, J, Rehnstrom, K, Megy, K, Talks, K, Peerlinck, K, Yates, K, Freson, K, Stirrups, K, Gomez, K, Smith, K G C, Rue-Albrecht, K, Gilmour, K, Masati, L, Scelsi, L, Southgate, L, Ranganathan, L, Ginsberg, L, Devlin, L, Willcocks, L, Ormondroyd, L, Lorenzo, L, Harper, L, Allen, L, Daugherty, L, Chitre, M, Kurian, M, Humbert, M, Tischkowitz, M, Bitner-Glindzicz, M, Erwood, M, Scully, M, Veltman, M, Caulfield, M, Layton, M, McCarthy, M, Ponsford, M, Toshner, M, Bleda, M, Wilkins, M, Mathias, M, Reilly, M, Afzal, M, Brown, M, Rondina, M, Stubbs, M, Haimel, M, Lees, M, Laffan, M A, Browning, M, Gattens, M, Richards, M, Michaelides, M, Lambert, M P, Makris, M, De Vries, M, Mahdi-Rogers, M, Saleem, M, Thomas, M, Holder, M, Eyries, M, Clements-Brod, N, Canham, N, Dormand, N, Zuydam, N V, Kingston, N, Ghali, N, Cooper, N, Morrell, N W, Yeatman, N, Roy, N, Shamardina, O, Alavijeh, O S, Gresele, P, Nurden, P, Chinnery, P, Deegan, P, Yong, P, Man, P Y W, Corris, P A, Calleja, P, Gissen, P, Bolton-Maggs, P, Rayner-Matthews, P, Ghataorhe, P K, Gordins, P, Stein, P, Collins, P, Dixon, P, Kelleher, P, Ancliff, P, Yu, P, Tait, R C, Linger, R, Doffinger, R, Machado, R, Kazmi, R, Sargur, R, Favier, R, Tan, R, Liesner, R, Antrobus, R, Sandford, R, Scott, R, Trembath, R, Horvath, R, Hadden, R, Mackenzieross, R V, Henderson, R, MacLaren, R, James, R, Ghurye, R, Dacosta, R, Hague, R, Mapeta, R, Armstrong, R, Noorani, S, Murng, S, Santra, S, Tuna, S, Johnson, S, Chong, S, Lear, S, Walker, S, Goddard, S, Mangles, S, Westbury, S, Mehta, S, Hackett, S, Nejentsev, S, Moledina, S, Bibi, S, Meehan, S, Othman, S, Revel-Vilk, S, Holden, S, McGowan, S, Staines, S, Savic, S, Burns, S, Grigoriadou, S, Papadia, S, Ashford, S, Schulman, S, Ali, S, Park, S M, Davies, S, Stock, S, Ali, S, Deevi, S V V, Gräf, S, Ghio, S, Wort, S J, Jolles, S, Austin, S, Welch, S, Meacham, S, Rankin, S, Walker, S, Seneviratne, S, Holder, S, Sivapalaratnam, S, Richardson, S, Kuijpers, T W, Kuijpers, T W, Bariana, T K, Bakchoul, T, Everington, T, Renton, T, Young, T, Aitman, T, Warner, T Q, Vale, T, Hammerton, T, Pollock, V, Matser, V, Cookson, V, Clowes, V, Qasim, W, Wei, W, Erber, W N, Ouwehand, W H, Astle, W, Egner, W, Turek, W, Henskens, Y, Tan, Y & Lynch, A G 2018, ' Telomerecat : A ploidy-agnostic method for estimating telomere length from whole genome sequencing data ', Scientific Reports, vol. 8, 1300 . https://doi.org/10.1038/s41598-017-14403-y, Scientific Reports, Vol 8, Iss 1, Pp 1-17 (2018), SCIENTIFIC REPORTS, Farmery, J H R, Smith, M L & Koziell, A & Lynch, A G 2018, ' Telomerecat : A ploidy-agnostic method for estimating telomere length from whole genome sequencing data ', Scientific Reports, vol. 8, no. 1, 1300 . https://doi.org/10.1038/s41598-017-14403-y
Publication Year :
2018

Abstract

Funding: Cancer Research UK Programme Grant to Simon Tavaré (C14303/A17197) (JHRF, AGL, MLS); European Commission through the Horizon 2020 project SOUND (Grant Agreement no. 633974) (AGL). Telomere length is a risk factor in disease and the dynamics of telomere length are crucial to our understanding of cell replication and vitality. The proliferation of whole genome sequencing represents an unprecedented opportunity to glean new insights into telomere biology on a previously unimaginable scale. To this end, a number of approaches for estimating telomere length from whole-genome sequencing data have been proposed. Here we present Telomerecat, a novel approach to the estimation of telomere length. Previous methods have been dependent on the number of telomeres present in a cell being known, which may be problematic when analysing aneuploid cancer data and non-human samples. Telomerecat is designed to be agnostic to the number of telomeres present, making it suited for the purpose of estimating telomere length in cancer studies. Telomerecat also accounts for interstitial telomeric reads and presents a novel approach to dealing with sequencing errors. We show that Telomerecat performs well at telomere length estimation when compared to leading experimental and computational methods. Furthermore, we show that it detects expected patterns in longitudinal data, repeated measurements, and cross-species comparisons. We also apply the method to a cancer cell data, uncovering an interesting relationship with the underlying telomerase genotype. Publisher PDF

Details

Language :
English
ISSN :
20452322
Database :
OpenAIRE
Journal :
Scientific reports, 8(1). Nature Publishing Group, Scientific Reports, Scientific Reports, 8(1):1300. Nature Publishing Group, Farmery, J H R, Smith, M L, Huissoon, A, Furnell, A, Mead, A, Levine, A P, Manzur, A, Thrasher, A, Greenhalgh, A, Parker, A, Sanchis-Juan, A, Richter, A, Gardham, A, Lawrie, A, Sohal, A, Creaser-Myers, A, Frary, A, Greinacher, A, Themistocleous, A, Peacock, A J, Marshall, A, Mumford, A, Rice, A, Webster, A, Brady, A, Koziell, A, Manson, A, Chandra, A, Hensiek, A, Veld, A H IT, Maw, A, Kelly, A M, Moore, A, Vonk Noordegraaf, A, Attwood, A, Herwadkar, A, Ghofrani, A, Houweling, A C, Girerd, B, Furie, B, Treacy, C M, Millar, C M, Sewell, C, Roughley, C, Titterton, C, Williamson, C, Hadinnapola, C, Deshpande, C, Toh, C-H, Bacchelli, C, Patch, C, Geet, C V, Babbs, C, Bryson, C, Penkett, C J, Rhodes, C J, Watt, C, Bethune, C, Booth, C, Lentaigne, C, McJannet, C, Church, C, French, C, Samarghitean, C, Halmagyi, C, Gale, D, Greene, D, Hart, D, Allsup, D, Bennett, D, Edgar, D, Kiely, D G, Gosal, D, Perry, D J, Keeling, D, Montani, D, Shipley, D, Whitehorn, D, Fletcher, 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Kuijpers, T, Kuijpers, T W, Bariana, T K, Bakchoul, T, Everington, T, Renton, T, Young, T, Aitman, T, Warner, T Q, Vale, T, Hammerton, T, Pollock, V, Matser, V, Cookson, V, Clowes, V, Qasim, W, Wei, W, Erber, W N, Ouwehand, W H, Astle, W, Egner, W, Turek, W, Henskens, Y, Tan, Y & Lynch, A G 2018, ' Telomerecat: A ploidy-agnostic method for estimating telomere length from whole genome sequencing data ', Scientific Reports, vol. 8, no. 1, 1300 . https://doi.org/10.1038/s41598-017-14403-y, Farmery, J H R, Smith, M L, Huissoon, A, Furnell, A, Mead, A, Levine, A P, Manzur, A, Thrasher, A, Greenhalgh, A, Parker, A, Sanchis-Juan, A, Richter, A, Gardham, A, Lawrie, A, Sohal, A, Creaser-Myers, A, Frary, A, Greinacher, A, Themistocleous, A, Peacock, A J, Marshall, A, Mumford, A, Rice, A, Webster, A, Brady, A, Koziell, A, Manson, A, Chandra, A, Hensiek, A, Veld, A H I T, Maw, A, Kelly, A M, Moore, A, Vonk Noordegraaf, A, Attwood, A, Herwadkar, A, Ghofrani, A, Houweling, A C, Girerd, B, Furie, B, Treacy, C M, Millar, C M, Sewell, C, Roughley, C, Titterton, C, Williamson, C, Hadinnapola, C, Deshpande, C, Toh, C H, Bacchelli, C, Patch, C, Geet, C V, Babbs, C, Bryson, C, Penkett, C J, Rhodes, C J, Watt, C, Bethune, C, Booth, C, Lentaigne, C, McJannet, C, Church, C, French, C, Samarghitean, C, Halmagyi, C, Gale, D, Greene, D, Hart, D, Allsup, D, Bennett, D, Edgar, D, Kiely, D G, Gosal, D, Perry, D J, Keeling, D, Montani, D, Shipley, D, Whitehorn, D, Fletcher, D, Krishnakumar, D, Grozeva, D, Kumararatne, D, Thompson, D, Josifova, D, Maher, E, Wong, E K S, Murphy, E, Dewhurst, E, Louka, E, Rosser, E, Chalmers, E, Colby, E, Drewe, E, McDermott, E, Thomas, E, Staples, E, Clement, E, Matthews, E, Wakeling, E, Oksenhendler, E, Turro, E, Reid, E, Wassmer, E, Raymond, F L, Hu, F, Kennedy, F, Soubrier, F, Flinter, F, Kovacs, G, Polwarth, G, Ambegaonkar, G, Arno, G, Hudson, G, Woods, G, Coghlan, G, Hayman, G, Arumugakani, G, Schotte, G, Cook, H T, Alachkar, H, Lango-Allen, H, Lango-Allen, H, Stark, H, Stauss, H, Schulze, H, Boggard, H J, Baxendale, H, Dolling, H, Firth, H, Gall, H, Watson, H, Longhurst, H, Markus, H S, Watkins, H, Simeoni, I, Emmerson, I, Roberts, I, Quinti, I, Wanjiku, I, Gibbs, J S R, Thaventhiran, J, Whitworth, J, Hurst, J, Collins, J, Suntharalingam, J, Payne, J, Thachil, J, Martin, J M, Carmichael, J, Maimaris, J, Paterson, J, Pepke-Zaba, J, Heemskerk, J W M, Gebhart, J, Davis, J, Pasi, J, Bradley, J R, Wharton, J, Stephens, J, Rankin, J, Anderson, J, Vogt, J, Von Ziegenweldt, J, Rehnstrom, K, Megy, K, Talks, K, Peerlinck, K, Yates, K, Freson, K, Stirrups, K, Gomez, K, Smith, K G C, Rue-Albrecht, K, Gilmour, K, Masati, L, Scelsi, L, Southgate, L, Ranganathan, L, Ginsberg, L, Devlin, L, Willcocks, L, Ormondroyd, L, Lorenzo, L, Harper, L, Allen, L, Daugherty, L, Chitre, M, Kurian, M, Humbert, M, Tischkowitz, M, Bitner-Glindzicz, M, Erwood, M, Scully, M, Veltman, M, Caulfield, M, Layton, M, McCarthy, M, Ponsford, M, Toshner, M, Bleda, M, Wilkins, M, Mathias, M, Reilly, M, Afzal, M, Brown, M, Rondina, M, Stubbs, M, Haimel, M, Lees, M, Laffan, M A, Browning, M, Gattens, M, Richards, M, Michaelides, M, Lambert, M P, Makris, M, De Vries, M, Mahdi-Rogers, M, Saleem, M, Thomas, M, Holder, M, Eyries, M, Clements-Brod, N, Canham, N, Dormand, N, Zuydam, N V, Kingston, N, Ghali, N, Cooper, N, Morrell, N W, Yeatman, N, Roy, N, Shamardina, O, Alavijeh, O S, Gresele, P, Nurden, P, Chinnery, P, Deegan, P, Yong, P, Man, P Y W, Corris, P A, Calleja, P, Gissen, P, Bolton-Maggs, P, Rayner-Matthews, P, Ghataorhe, P K, Gordins, P, Stein, P, Collins, P, Dixon, P, Kelleher, P, Ancliff, P, Yu, P, Tait, R C, Linger, R, Doffinger, R, Machado, R, Kazmi, R, Sargur, R, Favier, R, Tan, R, Liesner, R, Antrobus, R, Sandford, R, Scott, R, Trembath, R, Horvath, R, Hadden, R, Mackenzieross, R V, Henderson, R, MacLaren, R, James, R, Ghurye, R, Dacosta, R, Hague, R, Mapeta, R, Armstrong, R, Noorani, S, Murng, S, Santra, S, Tuna, S, Johnson, S, Chong, S, Lear, S, Walker, S, Goddard, S, Mangles, S, Westbury, S, Mehta, S, Hackett, S, Nejentsev, S, Moledina, S, Bibi, S, Meehan, S, Othman, S, Revel-Vilk, S, Holden, S, McGowan, S, Staines, S, Savic, S, Burns, S, Grigoriadou, S, Papadia, S, Ashford, S, Schulman, S, Ali, S, Park, S M, Davies, S, Stock, S, Ali, S, Deevi, S V V, Gräf, S, Ghio, S, Wort, S J, Jolles, S, Austin, S, Welch, S, Meacham, S, Rankin, S, Walker, S, Seneviratne, S, Holder, S, Sivapalaratnam, S, Richardson, S, Kuijpers, T W, Kuijpers, T W, Bariana, T K, Bakchoul, T, Everington, T, Renton, T, Young, T, Aitman, T, Warner, T Q, Vale, T, Hammerton, T, Pollock, V, Matser, V, Cookson, V, Clowes, V, Qasim, W, Wei, W, Erber, W N, Ouwehand, W H, Astle, W, Egner, W, Turek, W, Henskens, Y, Tan, Y & Lynch, A G 2018, ' Telomerecat : A ploidy-agnostic method for estimating telomere length from whole genome sequencing data ', Scientific Reports, vol. 8, 1300 . https://doi.org/10.1038/s41598-017-14403-y, Scientific Reports, Vol 8, Iss 1, Pp 1-17 (2018), SCIENTIFIC REPORTS, Farmery, J H R, Smith, M L & Koziell, A & Lynch, A G 2018, ' Telomerecat : A ploidy-agnostic method for estimating telomere length from whole genome sequencing data ', Scientific Reports, vol. 8, no. 1, 1300 . https://doi.org/10.1038/s41598-017-14403-y
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