Back to Search Start Over

The complete mitochondrial genome of Talpa aquitania (Talpidae; Insectivora), a mole species endemic to northern Spain and southern France

Authors :
Pedro Lorite
Antonio Sánchez
Gaël Aleix-Mata
Juana Gutiérrez
Francisco J. Ruiz-Ruano
Juan A. Marchal
Source :
Molecular Biology Reports. 47:2397-2403
Publication Year :
2020
Publisher :
Springer Science and Business Media LLC, 2020.

Abstract

The complete mitogenome sequence of Talpa aquitania, a recently described Talpa species, was assembled using whole-genome sequencing data. It varies in length from 16,776 to 16,846 bp, contains 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, one origin of L-strand replication, and a control region. In the control region, which varied from 1320 to 1390 bp, we identified the extended termination-associated sequence (ETAS-1 and ETAS-2) and the conserved sequence blocks (CSB-1, 2, 3, B, C, D, E, F). In addition, this region includes a 10 bp tandem repeat DNA sequence, with a variable number of repeats that suggest the existence of heteroplasmy. Phylogeny reconstructions based on Maximum Likelihood, Neighbor-joining and Bayesian inference analyses yielded phylogenies with similar topologies demonstrating that T. aquitania and T. occidentalis are sister species.

Details

ISSN :
15734978 and 03014851
Volume :
47
Database :
OpenAIRE
Journal :
Molecular Biology Reports
Accession number :
edsair.doi.dedup.....bfc800a14e0b37c8f387461f1d6642bf