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Overexpression, purification, crystallization and preliminary structural studies ofp-coumaric acid decarboxylase fromLactobacillus plantarum
- Source :
- Digital.CSIC. Repositorio Institucional del CSIC, instname
- Publication Year :
- 2007
- Publisher :
- International Union of Crystallography (IUCr), 2007.
-
Abstract
- The substrate-inducible p-coumaric acid decarboxylase (PDC) from Lactobacillus plantarum has been overexpressed in Escherichia coli, purified and confirmed to possess decarboxylase activity. The recombinant His6-tagged enzyme was crystallized using the hanging-drop vapour-diffusion method from a solution containing 20%(w/v) PEG 4000, 12%(w/v) 2-propanol, 0.2 M sodium acetate, 0.1 M Tris–HCl pH 8.0 with 0.1 M barium chloride as an additive. Diffraction data were collected in-house to 2.04 A ° resolution. Crystals belonged to the tetragonal space group P43, with unit-cell parameters a = b = 43.15, c = 231.86 A ° . The estimated Matthews coefficient was 2.36 A ° 3 Da 1, corresponding to 48% solvent content, which is consistent with the presence of two protein molecules in the asymmetric unit. The structure of PDC has been determined by the molecular-replacement method. Currently, the structure of PDC complexed with substrate analogues is in progress, with the aim of elucidating the structural basis of the catalytic mechanism<br />JMM thanks the Ministerio de Educación y Ciencia for a research grant (BFU2004-01554/BMC; DGCYT) in support of his research. This work was also supported by grants AGL2005-00470 (CICYT) and S-0505/AGR000153 (CAM). HR is a recipient of a I3P predoctoral fellowship from the CSIC.
- Subjects :
- Carboxy-Lyases
Protein Conformation
Stereochemistry
Molecular Sequence Data
Biophysics
Crystallography, X-Ray
medicine.disease_cause
Biochemistry
Chromatography, Affinity
p-Coumaric acid
law.invention
chemistry.chemical_compound
p-coumaric acid decarboxylase
Structural Biology
law
PEG ratio
Escherichia coli
Genetics
medicine
Amino Acid Sequence
Crystallization
DNA Primers
chemistry.chemical_classification
Base Sequence
biology
Substrate (chemistry)
Condensed Matter Physics
biology.organism_classification
Recombinant Proteins
Crystallography
Enzyme
chemistry
Crystallization Communications
Electrophoresis, Polyacrylamide Gel
Sodium acetate
Lactobacillus plantarum
Subjects
Details
- ISSN :
- 17443091
- Volume :
- 63
- Database :
- OpenAIRE
- Journal :
- Acta Crystallographica Section F Structural Biology and Crystallization Communications
- Accession number :
- edsair.doi.dedup.....c13cb70461ad5afa96e208172d753bf5
- Full Text :
- https://doi.org/10.1107/s1744309107008846